CF510055

Overview
NameCF510055
Unique NameCF510055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_PARDE (Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.466e-25
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            IV  ARTP+G FLG+ ++L A +LG+I ++A ++RA +DPS V E   G VL+A  GQ PARQA +  G+P       +N+VC SGL+ + LA+Q + LG   ++VAGG ESMS
Sbjct:    6 IVSAARTPVGSFLGSFANLPAHELGAIVLKAVVERAGIDPSEVSETILGQVLTAAQGQNPARQAHIKVGLPRESAAWVINQVCGSGLRTVALAAQQVLLGDARIVVAGGQESMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAES (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2384 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.445e-25
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  119 RTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            RTP+G F G    + A +LG+  I   L+ + +DP+ + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLKAI LA QSI  G N++++AGGMESMS
Sbjct:   11 RTPIGVFGGVFKDIPAYELGATVIRQILEHSQIDPNEINEVILGNVLQAGQGQNPARIAAIHGGVPEAVPSFTVNKVCGSGLKAIQLAYQSIVAGDNEIVIAGGMESMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAEQ (Probable acetyl-CoA acyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0032 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.445e-25
Identity = 57/109 (52.29%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  119 RTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            RTP+G F G    + A +LG+  I   L+ + +DP+ + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLKAI LA QSI  G N++++AGGMESMS
Sbjct:   11 RTPIGVFGGVFKDIPAYELGATVIRQILEHSQIDPNEINEVILGNVLQAGQGQNPARIAAIHGGVPEAVPSFTVNKVCGSGLKAIQLAYQSIVAGDNEIVIAGGMESMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.445e-25
Identity = 55/116 (47.41%), Postives = 77/116 (66.38%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            + IV   RT +G F G LS+L AT +G+  ++A ++R  + P  V EV  G VL+A  GQ PARQ  L AG+P++V   T+NKVC SGLKA+ LA Q++  G  ++++AGG ESMS
Sbjct:    5 IVIVDAGRTAIGTFGGALSALQATDIGTTVLKALIERTGIAPEQVSEVILGQVLTAGCGQNPARQTTLMAGLPHTVPAMTINKVCGSGLKAVHLAMQAVACGDAEIVIAGGQESMS 120          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.103e-24
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            R+V I   ART +G F G   S+SA +LG  A + A+KRAN+ P ++ E   G VL+A LGQ  ARQ ALGAGIP      T+N VC SGL+++ +ASQ I LG  D+++ GG E+MS
Sbjct:    2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAW (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MW2) GN=MW0330 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAS (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0330 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAR (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0351 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAN (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain N315) GN=SA0342 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAM (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0354 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
The following BLAST results are available for this feature:
BLAST of CF510055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
THIL_PARDE6.466e-2548.25Acetyl-CoA acetyltransferase OS=Paracoccus denitri... [more]
THLA_STAES8.445e-2552.29Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAEQ8.445e-2552.29Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIL_THIVI8.445e-2547.41Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
THLA_CLOD61.103e-2449.15Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
THLA_STAAW2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAS2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAR2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAN2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAAM2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-570 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510055 ID=CF510055; Name=CF510055; organism=Citrus sinensis; type=EST; length=450bp
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
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