CF510055

Overview
NameCF510055
Unique NameCF510055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAC (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain COL) GN=SACOL0426 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAA8 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAA3 (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0355 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.457e-24
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            +DV IV   RT +G F G+L+ + A +LG+  I   L++  +D   V EV  G VL+A  GQ PARQAA+ AG+P  V   T+NKVC SGLKA+ L +Q+I+ G  +VIVAGG E+MS
Sbjct:    2 QDVVIVAATRTAVGSFQGSLAGIPAPELGAAVIRRLLEQTGLDAGQVDEVILGQVLTAGSGQNPARQAAIKAGLPVGVPAMTLNKVCGSGLKALHLGAQAIRCGDAEVIVAGGQENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_STAAB (Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V +    RTP+G F G    + A  LG+  IE  +K   ++PS + EV  GNVL A  GQ PAR AA+  G+P +V   TVNKVC SGLK+I LA QSI  G ND+++AGGME+MS
Sbjct:    4 VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEINEVIIGNVLQAGQGQNPARIAAMKGGLPETVPVFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.593e-23
Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            +V IV   RT +G F G L+ + A +LG+  I+A L++  V P  V EV  G VL+A  GQ PARQA + AG+P +   TT+N VC SGL+A+ LA+Q+I  G  D+++AGG ESMS
Sbjct:    2 EVAIVAAQRTAIGSFGGGLAKIPAPELGATVIKALLEKTGVKPEDVSEVILGQVLTAGSGQNPARQALIKAGLPVTTPATTLNVVCGSGLRAVHLAAQAILAGDADIVIAGGQESMS 118          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THL_BACSU (Acetyl-CoA acetyltransferase OS=Bacillus subtilis GN=mmgA PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.348e-22
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            R   IV  ARTP G F G L  + A +LG I ++ AL++A V    V+    G V+ A  GQ P+RQAA  AG+P SV   T+NKVCASGL+A+ L  Q I+    D++VAGGMESMSN
Sbjct:    2 RKTVIVSAARTPFGKFGGVLKEVKAAELGGIVMKEALQQAGVSGDDVEGNVMGMVVQAGSGQIPSRQAARLAGMPWSVPSETLNKVCASGLRAVTLCDQMIRAQDADILVAGGMESMSN 120          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_RHIME (Acetyl-CoA acetyltransferase OS=Rhizobium meliloti GN=phbA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 8.739e-22
Identity = 56/116 (48.28%), Postives = 71/116 (61.21%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            + I   ART +G F G   +  A +LG+ AI+A L+RA V+   V EV  G VL A  GQ PARQAA+ AG+P       +N++C SGL+A+ L  Q I  G   VIVAGGMESMS
Sbjct:    6 IVIASAARTAVGSFNGAFGNTLAHELGAAAIKAVLERAGVEAGEVDEVILGQVLPAGEGQNPARQAAMKAGLPQEKTAWGMNQLCGSGLRAVALGMQQIATGDAKVIVAGGMESMS 121          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 100.138 bits (248), Expect = 4.337e-21
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            ++  ART +G F G  ++  A +LG+  I A L+RA V    V EV  G VL A  GQ PARQAA+ AG+P       +N++C SGL+A+ L  Q I  G   +IVAGGMESMS
Sbjct:    7 VIASARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMS 120          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THL_CLODI (Acetyl-CoA acetyltransferase (Fragment) OS=Clostridium difficile GN=thi PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 9.998e-18
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKA 370
            R+V I   ART +G F G   S+SA +LG  A + A+KRAN+ P ++ E   G VL+A LGQ  ARQ ALGAGIP      T+N VC SGL++
Sbjct:    2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRS 94          
The following BLAST results are available for this feature:
BLAST of CF510055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
THLA_STAAC2.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA82.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THLA_STAA32.457e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
ATOB_PSEAE2.457e-2449.15Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
THLA_STAAB3.209e-2450.00Probable acetyl-CoA acyltransferase OS=Staphylococ... [more]
THIL_CHRVO1.593e-2347.86Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
THL_BACSU1.348e-2249.58Acetyl-CoA acetyltransferase OS=Bacillus subtilis ... [more]
THIL_RHIME8.739e-2248.28Acetyl-CoA acetyltransferase OS=Rhizobium meliloti... [more]
THIL_ZOORA4.337e-2146.49Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
THL_CLODI9.998e-1849.46Acetyl-CoA acetyltransferase (Fragment) OS=Clostri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-570 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510055 ID=CF510055; Name=CF510055; organism=Citrus sinensis; type=EST; length=450bp
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
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