CF510055
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 2 Query: 92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQA-PARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 R V IV RTP G + G L +AT L A AAL V P + V GNV+ ++ A AR L G+P T+N++C SG ++I+ Q I +V++ GG ESMS Sbjct: 5 RGVFIVAAKRTPFGAYGGLLKDFTATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMS 123
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 IV RTP G + G L+++ A LG+I I A ++R +V+ + V +V +G A + R +AL AG+P V TTVN++C S L AI +A+++I+ G +I+AGG+ESMS Sbjct: 6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS 121
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 R+ I RTP+G + G LS + A L +I + E ++ +D + +V G A + AR A L AG+P SV TT+N++C SGL A+ A+++I+ G D+++AGG+ESMS Sbjct: 2 REAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMS 121
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 80 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448 S+ PRDV +V RTPMG G ++ A L + IEA +R +DP V++V +G V + G ARQ +L IP+ TVN++C S + AI A+Q+IQ G DV + GG+E M + Sbjct: 2 SLNPRDVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGH 127
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 2 Query: 104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 IV RTP G + G L+++ A LG+I I A ++R +V+ + V +V +G A + R +AL AG+P V TTVN++C S L AI +A+++I+ G +I+AGG+ESMS Sbjct: 6 IVDAIRTPFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMS 121
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14 Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 80 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLS-ANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448 S++PRDV IV ARTPMG G ++ A L + I L R A +DP+ + ++ +G V+ G AR L AG+P++V TVN++C S + A+ A+ +I G+ DV + GG+E M + Sbjct: 2 SLQPRDVVIVDYARTPMGRSKNGCYRNVRADDLSADLITGLLARNAALDPAQIDDMIWGCVMQRGEQGFNVARNILLRAGLPHTVPAQTVNRLCGSSMSALHTAAANIMAGLGDVYLVGGVEHMGH 127
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.759e-14 Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 80 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448 S+ P+DV IV RTPMG G + A KL + I+A + R N D L ++V +G V + G AR ++ AG+P + TVN++C S ++A+ ASQSI G DV V GG+E M + Sbjct: 2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHMGH 127
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.144e-13 Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 2 Query: 92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 R V IV RTP G + G L + T + A AAL V P V V GNV+ ++ AR L GIP T+N++C SG ++I+ Q I ++V++ GG ESMS Sbjct: 5 RGVFIVAAKRTPFGAYGGLLKDFTPTDMAEFAARAALSAGRVSPETVDSVVVGNVMQSSSDAIYLARHVGLRVGIPKETPAITINRLCGSGFQSIVSGCQEICSRDSEVVLCGGTESMS 123
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.494e-13 Identity = 48/120 (40.00%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALK-RANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445 RDV I RTP+G F G L+ + A L ++ ++A ++ V V EVFFG A + AR A L AG+P S+ T+N++CASG+ AI A ++I G ++ +AGG+ESMS Sbjct: 2 RDVFICDAIRTPIGRFGGALAGVRADDLAAVPLKALIEPNPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMS 121
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.494e-13 Identity = 48/126 (38.10%), Postives = 71/126 (56.35%), Query Frame = 2 Query: 92 RDVCIVGVARTPMGGFLG------TLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448 +DV IV RTPMG G LSA + SI L+ N+DP+ ++++++G V G AR AAL AGIP V TVN++C S ++A+ AS++IQ+G D+ + GG+E M + Sbjct: 2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSIL----LRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGH 123 The following BLAST results are available for this feature:
BLAST of CF510055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510055 ID=CF510055; Name=CF510055; organism=Citrus sinensis; type=EST; length=450bpback to top |