CF510057

Overview
NameCF510057
Unique NameCF510057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF5A_RAT (Kinesin heavy chain isoform 5A OS=Rattus norvegicus GN=Kif5a PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.570e-20
Identity = 50/125 (40.00%), Postives = 80/125 (64.00%), Query Frame = 2
Query:   95 LSALGDVISALAQKS-AHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-----IRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQK 451
            LSALG+VISALA+ + +++PYR+SK+T++LQDSLGG+ +T MF+  +P      ET STL F +R  +I+  A+ + + + E       + +E+    K+T+ K EAEL + R G   N  E+++
Sbjct:  259 LSALGNVISALAEGTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETKSTLMFGQRAKTIKNTASVNLELTAEQWKKKYEKEKEKTKAQKETIAKLEAELSRWRNG--ENVPETER 381          

HSP 2 Score: 36.5798 bits (83), Expect = 1.570e-20
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+L DLAGSE+V K+ A G  L EA++IN+S
Sbjct:  228 LYLADLAGSEKVSKTGAEGAVLDEAKNINKS 258          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KI13A_MOUSE (Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.024e-20
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 2
Query:   95 LSALGDVISALAQKSA------HIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTLEKKEA 397
            L+ LG VIS+LA ++A       +PYR+S LT +L+D+LGG+++T M   I+P  +   ET+STL++A+R   I   A  +   + + IRELREE+  L++ L K EA
Sbjct:  279 LTTLGLVISSLADQAAGKGKNKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSKAEA 386          

HSP 2 Score: 43.5134 bits (101), Expect = 2.024e-20
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 1
Query:    7 LVDLAGSERVDKSEAVGERLKEAQHINRS 93
            LVDLAGSERV K+ A GERLKE  +IN+S
Sbjct:  250 LVDLAGSERVSKTGAAGERLKEGSNINKS 278          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF27_HUMAN (Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.032e-20
Identity = 45/109 (41.28%), Postives = 72/109 (66.06%), Query Frame = 2
Query:   95 LSALGDVISALA---QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSI-ELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQ 409
            L ALG+VISAL    +KS+HIPYR++K+T++L+DSLGG AKT+M   ++P  +   E++++LK+A R  +I        + ES  I E+  EI  L++ L+ ++A + Q
Sbjct:  271 LLALGNVISALGDPRRKSSHIPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSNFDESLNSLKYANRARNIRNKPTVNFSPESDRIDEMEFEIKLLREALQSQQAGVSQ 379          

HSP 2 Score: 37.3502 bits (85), Expect = 2.032e-20
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 1
Query:    4 HLVDLAGSERVDKSEAVGERLKEAQHIN 87
            H VDLAGSERV K+   GER KE+  IN
Sbjct:  241 HFVDLAGSERVTKTGNTGERFKESIQIN 268          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KINH_GIBMO (Kinesin heavy chain OS=Gibberella moniliformis GN=KLP1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.045e-20
Identity = 69/218 (31.65%), Postives = 101/218 (46.33%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQ-KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKPRAVSPFHTSESQKSRAVSPFHTSESQKPRAVSPFHVPRYGISASLKPGINQPNDDSRSLEPRSTSSGKQRRSRVPSALTDKEPLPRFL 718
            KK+N     LSALG VI+AL   KS+HIPYR+SKLT++LQ+SLGG+++T + ++ +P      ET+ TL+F  R  SI+   A+ N E           + LK  L+K + ++      ++    E Q  RA          K R  +P  T    + +A             S +P       DSRS  P  +      R+  PS   DK+    FL
Sbjct:  255 KKIN---KSLSALGMVINALTDGKSSHIPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLGTLRFGMRAKSIK-NKAKVNAELSP--------AELKSLLKKAQGQVTNFESYISSLEGEIQMWRA-----GEAVPKERWATPLTTDAVARTKA---------DARTSTRPSTPSLISDSRSETPAISD-----RAGTPSLPLDKDEREEFL 441          

HSP 2 Score: 38.5058 bits (88), Expect = 2.045e-20
Identity = 19/31 (61.29%), Postives = 25/31 (80.65%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L LVDLAGSE+V K+ A G+ L+EA+ IN+S
Sbjct:  230 LFLVDLAGSEKVGKTGASGQTLEEAKKINKS 260          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF4A_HUMAN (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.648e-20
Identity = 44/111 (39.64%), Postives = 69/111 (62.16%), Query Frame = 2
Query:   95 LSALGDVISALA--QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRG 421
            L  LG+VISAL   +K   +PYR+SKLT++LQDSLGG++ TLM   ++P  + + ET++TL++A+R   I+      NK    I     E+++LKQ +++ +  L Q   G
Sbjct:  267 LLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIK------NKPIVNIDPQTAELNHLKQQVQQLQVLLLQAHGG 371          

HSP 2 Score: 43.1282 bits (100), Expect = 2.648e-20
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINR 90
            LHLVDLAGSER  K++A G+RLKE  +INR
Sbjct:  236 LHLVDLAGSERQKKTKAEGDRLKEGININR 265          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF3_DICDI (Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.649e-20
Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 2
Query:   95 LSALGDVISALAQ-KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLR 415
            LS+LG+VI+AL   KS HIPYR+SKLT+VLQ+SLGG+++T + ++ +P      ETISTL+F  R  +I+   A+ N+E           + LK  L K E E+E L+
Sbjct:  261 LSSLGNVINALTDGKSTHIPYRDSKLTRVLQESLGGNSRTTLIINCSPSSYNEAETISTLRFGSRAKNIK-NKAKINQE--------RSAAELKILLSKAENEIENLK 359          

HSP 2 Score: 37.3502 bits (85), Expect = 2.649e-20
Identity = 18/31 (58.06%), Postives = 24/31 (77.42%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSE++ K+ A G  L EA+ IN+S
Sbjct:  230 LYLVDLAGSEKISKTGAQGTTLDEAKMINKS 260          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KLP1_SCHPO (Kinesin-like protein 1 OS=Schizosaccharomyces pombe GN=klp1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 2.665e-20
Identity = 36/86 (41.86%), Postives = 61/86 (70.93%), Query Frame = 2
Query:   68 KKLNILIDHLSALGDVISALAQKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNK 325
            K L+ L D + ALG+  ++  ++ +HIPYRNSKLT +L+ SLG  AKTLMFV+++P  +   +T+++L+FA +V+  ++G+ +  K
Sbjct:  746 KSLSCLGDVIHALGNASNSTTKEKSHIPYRNSKLTYLLKYSLGKGAKTLMFVNVSPLKSQFMDTLNSLRFATKVNDTKVGSIKHYK 831          

HSP 2 Score: 44.2838 bits (103), Expect = 2.665e-20
Identity = 21/31 (67.74%), Postives = 27/31 (87.10%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            L+LVDLAGSER+  S+AVG+RL+E Q IN+S
Sbjct:  717 LNLVDLAGSERLSYSQAVGDRLRETQAINKS 747          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KI13A_HUMAN (Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.422e-20
Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   95 LSALGDVISALAQ------KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTLEKKEA 397
            L+ LG VIS+LA       KS  +PYR+S LT +L+D+LGG+++T M   I+P  +   ET+STL++A+R   I   A  +   + + IRELREE+  L++ L + EA
Sbjct:  279 LTTLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEA 386          

HSP 2 Score: 43.5134 bits (101), Expect = 3.422e-20
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = 1
Query:    7 LVDLAGSERVDKSEAVGERLKEAQHINRS 93
            LVDLAGSERV K+ A GERLKE  +IN+S
Sbjct:  250 LVDLAGSERVSKTGAAGERLKEGSNINKS 278          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF1A_DROPS (Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.427e-20
Identity = 60/205 (29.27%), Postives = 100/205 (48.78%), Query Frame = 2
Query:   95 LSALGDVISALAQ---------KSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGE-IRELREEISNLKQTLE------KKEAELEQLRRGV-----TRNTSESQKPRAVSPFHTSESQKSRAVSPFHTSESQKPRAVSPFHVPRYGISASLKPGINQPNDDSRSLEPRST 646
            L+ LG VISALA+         K+  IPYR+S LT +L+++LGG++KT M   I+P      ET+STL++A+R   I   A  +   + + IREL+EEI  L+  L+      ++E EL +   G+     +RN + S    AV     SE    + ++  + +  +K +      + R  + A +   + +         P+ T
Sbjct:  275 LTTLGKVISALAEVASKKKHNKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADRAKQIVCKAVVNEDANAKLIRELKEEIQKLRDLLKAEGIEVQEEDELNKSTTGIKSPSKSRNRNGSTTEMAVDQLQASE----KLIAELNETWEEKLKRTEEIRLQREAVFAEMGVAVKEDGITVGVFSPKKT 475          

HSP 2 Score: 39.2762 bits (90), Expect = 3.427e-20
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 1
Query:    1 LHLVDLAGSERVDKSEAVGERLKEAQHINRS 93
            + LVDLAGSER D + A G RLKE  +IN+S
Sbjct:  244 ISLVDLAGSERADSTGAKGTRLKEGANINKS 274          
BLAST of CF510057 vs. ExPASy Swiss-Prot
Match: KIF7_DANRE (Kinesin-like protein kif7 OS=Danio rerio GN=kif7 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.438e-20
Identity = 47/129 (36.43%), Postives = 74/129 (57.36%), Query Frame = 2
Query:   95 LSALGDVISALA---QKSAHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEHNAIGETISTLKFAERVSSIELGAARSNKESGEIRELREEISNLKQTLEKKEAELEQLRRGVTRNTSESQKPRAVSPF 472
            L  LG+VI AL    +K  HIPYR+SK+T++L+DSLGG+AKTLM   I+P  +   E+++TL +A+R  +I+      N+ +   R   + I  L+  ++     LE  +R  TR  + S   + + PF
Sbjct:  277 LLVLGNVIGALGDPKRKGTHIPYRDSKITRILKDSLGGNAKTLMIACISPSSSDFDESLNTLNYAKRARNIQ------NRATVNCRGEPDRIEGLELQIKALRRALENRQRSETRIIARSDPEKRLRPF 399          

HSP 2 Score: 37.3502 bits (85), Expect = 3.438e-20
Identity = 18/28 (64.29%), Postives = 21/28 (75.00%), Query Frame = 1
Query:    4 HLVDLAGSERVDKSEAVGERLKEAQHIN 87
            H VDLAGSER+ K+   GERLKE+  IN
Sbjct:  247 HFVDLAGSERILKTGNTGERLKESIQIN 274          
The following BLAST results are available for this feature:
BLAST of CF510057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
KIF5A_RAT1.570e-2040.00Kinesin heavy chain isoform 5A OS=Rattus norvegicu... [more]
KI13A_MOUSE2.024e-2041.67Kinesin-like protein KIF13A OS=Mus musculus GN=Kif... [more]
KIF27_HUMAN2.032e-2041.28Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF2... [more]
KINH_GIBMO2.045e-2031.65Kinesin heavy chain OS=Gibberella moniliformis GN=... [more]
KIF4A_HUMAN2.648e-2039.64Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]
KIF3_DICDI2.649e-2044.44Kinesin-related protein 3 OS=Dictyostelium discoid... [more]
KLP1_SCHPO2.665e-2041.86Kinesin-like protein 1 OS=Schizosaccharomyces pomb... [more]
KI13A_HUMAN3.422e-2041.67Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF... [more]
KIF1A_DROPS3.427e-2029.27Kinesin-like protein unc-104 OS=Drosophila pseudoo... [more]
KIF7_DANRE3.438e-2036.43Kinesin-like protein kif7 OS=Danio rerio GN=kif7 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-572 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510057 ID=CF510057; Name=CF510057; organism=Citrus sinensis; type=EST; length=720bp
CTTCATCTGGTGGATTTGGCTGGAAGTGAGAGAGTTGATAAATCAGAAGC
TGTAGGTGAAAGATTAAAAGAAGCTCAACATATTAATAGATCACCTTTCA
GCTCTTGGAGATGTCATTTCTGCTCTTGCCCAAAAGAGTGCACATATTCC
TTACAGAAACAGCAAACTTACTCAAGTATTACAGGATTCTTTAGGTGGGC
ATGCTAAAACATTAATGTTTGTACACATAAATCCTGAACATAATGCTATT
GGAGAGACCATTAGCACACTCAAGTTTGCTGAGAGAGTTTCCTCCATAGA
ACTAGGGGCTGCCCGCTCTAACAAAGAAAGTGGTGAAATCCGAGAACTCA
GAGAAGAGATATCGAATCTTAAACAAACATTGGAGAAAAAGGAAGCAGAA
TTGGAACAACTGAGACGTGGGGTAACAAGAAATACTTCAGAATCTCAAAA
ACCAAGAGCAGTTTCACCTTTTCATACTTCAGAATCTCAAAAATCAAGAG
CAGTTTCACCTTTTCATACTTCAGAATCTCAAAAACCAAGAGCAGTTTCA
CCTTTTCATGTGCCACGATATGGAATTAGTGCTAGCTTGAAGCCTGGGAT
AAATCAGCCAAATGATGACAGTAGAAGCCTTGAGCCTAGAAGCACTTCTT
CAGGTAAGCAAAGGAGGTCAAGGGTTCCTTCTGCATTGACGGACAAAGAG
CCATTGCCAAGATTCCTTTA
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