CF510164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.589e-14 Identity = 39/68 (57.35%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 ++NR+Q A + LG ++ LP +AV+GGQS+GKSSVLE+ VG+DFLPRGSGIVTRRPL+L Sbjct: 14 VINRVQDAFSQLGT--------SVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLIL 73
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.644e-13 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 ++N++Q LG D LP + V+G QSSGKSSVLE+IVGRDFLPRGSGIVTRRPL+L Sbjct: 7 VINKLQDVFNTLGSDPLD---------LPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLIL 65
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.759e-13 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 121 LGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 L D DS + TL LP +AV+G QSSGKSS+LE++VGRDFLPRG+GIVTRRPLVL Sbjct: 14 LQDVMYDSGIDTL--DLPILAVVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVL 68
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DYNB_DICDI (Dynamin-B OS=Dictyostelium discoideum GN=dymB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.385e-12 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 ++N++Q ++G LP + V+G QSSGKSSVLE++VGRDFLPRGSG+VTRRPLVL Sbjct: 140 IINKLQENAALIGSE----------ITLPQIIVVGSQSSGKSSVLENLVGRDFLPRGSGLVTRRPLVL 197
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.085e-12 Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 169 LPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 LP +AV+G QSSGKSSVLES+VGRD LPRG+GIVTRRPL+L Sbjct: 25 LPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLIL 65
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.029e-12 Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 169 LPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 LPS+ V+G QS GKSSVLE+IVG+DFLPRG+GIVTRRPL+L Sbjct: 26 LPSIVVVGSQSCGKSSVLENIVGKDFLPRGTGIVTRRPLIL 66
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 4.029e-12 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 +VN++Q + G S + ALP V V+G QSSGKSSVLE++VGRDFLPRG+ I TRRPLVL Sbjct: 40 IVNKLQ---DIFAQLGSQSTI-----ALPQVVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVL 99
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 5.261e-12 Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 +VN++Q A + +G + L + LP + V+ QSSGKSSVLE+IVGRDFLPRG+GIVTRRPLVL Sbjct: 8 VVNQLQEAFSTVG-------VQNLID-LPQITVVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVL 67
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.975e-12 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 88 LVNRIQRACTVLGDYGGDSALPTLWEALPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 +VN++Q + G S + ALP VAV+G QSSGKSSVLE++VGRDFLPRG+ I TRRPL L Sbjct: 24 IVNKLQ---DIFAQLGSQSTI-----ALPQVAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLRL 83
BLAST of CF510164 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.975e-12 Identity = 32/41 (78.05%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 169 LPSVAVIGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVL 291 LP + V+G QSSGKSSVLES+VGRD LPRG+GIVTRRPL+L Sbjct: 25 LPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLIL 65 The following BLAST results are available for this feature:
BLAST of CF510164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510164 ID=CF510164; Name=CF510164; organism=Citrus sinensis; type=EST; length=291bpback to top |