CF510173

Overview
NameCF510173
Unique NameCF510173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:534..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 3.952e-52
Identity = 96/109 (88.07%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS+IRVGS+NGEE+YAPFKS++PMVNPDD+VFGGWDISDMNLADAM RA+V DIDLQKQLRPYME++VPLPGIYDPDFIAANQGSRANNVIKGTKKEQ+ QI
Sbjct:  101 YFGSLTQASSIRVGSFNGEEMYAPFKSLVPMVNPDDVVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMENIVPLPGIYDPDFIAANQGSRANNVIKGTKKEQVDQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.162e-52
Identity = 96/106 (90.57%), Postives = 105/106 (99.06%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQM 320
            YFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQGSRAN+VIKGTKKEQ+
Sbjct:  102 YFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQGSRANHVIKGTKKEQV 207          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 5.162e-52
Identity = 96/106 (90.57%), Postives = 105/106 (99.06%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQM 320
            YFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDISDMNLADAMARARV DIDLQKQLRPYME++VPLPGI+DPDFIAANQGSRAN+VIKGTKKEQ+
Sbjct:  102 YFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISDMNLADAMARARVLDIDLQKQLRPYMENIVPLPGIFDPDFIAANQGSRANHVIKGTKKEQV 207          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 4.370e-51
Identity = 95/109 (87.16%), Postives = 105/109 (96.33%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVNPD+IVFGGWDISDMNLADAM RA+V DIDLQKQLRPYMESMVPLPGIY+PDFIAANQGSRANNVIKG KK+Q+ +I
Sbjct:  101 YFGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVNPDEIVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMESMVPLPGIYNPDFIAANQGSRANNVIKGPKKQQVQRI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 9.735e-51
Identity = 93/109 (85.32%), Postives = 106/109 (97.25%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNP++IVFGGWDISDMNLADAMARA+V DIDLQKQ+RP+ME MVPLPGI+DPDFIAANQGSRAN+VIKGTKK+Q+ Q+
Sbjct:  101 YFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPEEIVFGGWDISDMNLADAMARAKVLDIDLQKQMRPFMEHMVPLPGIFDPDFIAANQGSRANHVIKGTKKQQLEQV 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 9.780e-35
Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 3
Query:    3 YFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            YFGS+  +S IR+G   NG + Y P K+++PMV+P+DIVFGGWDI++ NLADAM RA+VFD DLQ QL P+M+++ PLP IY PDFIAANQ  RANNV+ GTKKEQM QI
Sbjct:  100 YFGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVHPNDIVFGGWDINNANLADAMQRAQVFDYDLQVQLIPHMKNITPLPSIYFPDFIAANQKDRANNVLTGTKKEQMEQI 209          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.012e-31
Identity = 64/109 (58.72%), Postives = 82/109 (75.23%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSL Q+S + +G  +  E++ PF+ +LPMVNP+D+VF GWDIS +NLADAM RA V D  LQ+QLRPYME M P P IY P+FIAANQ  RA++ I GTK EQ+ +I
Sbjct:   96 YYGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVNPNDLVFDGWDISSLNLADAMFRAEVLDWQLQEQLRPYMEKMKPRPSIYIPEFIAANQEDRADHTIHGTKAEQVQKI 204          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.726e-31
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 3
Query:    3 YFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSLTQA  + +G    G+E++ PF S+LPMV PDD+VF GWDIS +NLA+AM RA+V D  LQ+QL P+ME+M P P +Y P+FIAANQ +RA+NVI GT+ +Q+ QI
Sbjct:   98 YYGSLTQAGTVSLGLDAEGKEVFVPFSSLLPMVAPDDLVFDGWDISSLNLAEAMRRAQVLDWGLQEQLWPHMEAMRPRPSVYIPEFIAANQSARADNVIPGTRAQQLEQI 207          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.023e-31
Identity = 64/109 (58.72%), Postives = 81/109 (74.31%), Query Frame = 3
Query:    3 YFGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSL Q+S   +GS    +++ PF+ +LPMV+P+DIVF GWDIS +NLADAM RA V D  +Q+QLRPYME M P P IY PDFIAANQ  RA++ I GTK EQ+ +I
Sbjct:   96 YYGSLFQSSTACLGSGPAGDVFVPFRDLLPMVHPNDIVFDGWDISSLNLADAMFRAEVLDWQIQEQLRPYMEKMKPRPSIYIPDFIAANQEDRADHTIHGTKAEQVQKI 204          
BLAST of CF510173 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.560e-31
Identity = 62/110 (56.36%), Postives = 85/110 (77.27%), Query Frame = 3
Query:    3 YFGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGSRANNVIKGTKKEQMLQI 329
            Y+GSLTQA  + +G   NG E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  LQ+QL P+MES+ P P +Y P+FIAANQ +RA+N+I GT+ +Q+ QI
Sbjct:   98 YYGSLTQAGTVNLGLDENGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEAMRRAQVLDCGLQEQLWPHMESLRPRPSVYIPEFIAANQTARADNLIPGTRAQQLEQI 207          
The following BLAST results are available for this feature:
BLAST of CF510173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_BRANA3.952e-5288.07Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO1_PHAVU5.162e-5290.57Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH5.162e-5290.57Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_SPIPO4.370e-5187.16Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO3_ARATH9.735e-5185.32Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI9.780e-3564.55Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA1.012e-3158.72Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1_BOVIN1.726e-3158.18Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1A_XENLA5.023e-3158.72Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_MOUSE6.560e-3156.36Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-688 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510173 ID=CF510173; Name=CF510173; organism=Citrus sinensis; type=EST; length=331bp
ATTATTTTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTAC
AATGGAGAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAA
CCCAGATGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGG
CTGATGCCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAA
CTTAGGCCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCC
TGATTTCATTGCTGCCAATCAAGGGTCGCGTGCCAACAACGTGATCAAAG
GAACCAAGAAAGAACAAATGCTACAAATCAT
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