CF510206

Overview
NameCF510206
Unique NameCF510206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length182
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.413e-17
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGI
Sbjct:  135 FGNGTETSHTLPHSATRAAMLVRINTLLQGYSGI 168

HSP 2 Score: 36.965 bits (84), Expect = 5.413e-17
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITK LN NITPCLPLRGT
Sbjct:  176 ITKFLNTNITPCLPLRGT 193
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL2_LITER (Phenylalanine ammonia-lyase 2 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.414e-17
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGI
Sbjct:  130 FGNGTETSHTLPHSATRAAMLVRINTLLQGYSGI 163

HSP 2 Score: 36.965 bits (84), Expect = 5.414e-17
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITK LN NITPCLPLRGT
Sbjct:  171 ITKFLNTNITPCLPLRGT 188
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PALY_POPTR (Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.035e-17
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTE+ HTLPHSATRAAMLVR+NTLLQGYSGI
Sbjct:  140 FGNGTETCHTLPHSATRAAMLVRINTLLQGYSGI 173

HSP 2 Score: 38.5058 bits (88), Expect = 7.035e-17
Identity = 16/18 (88.89%), Postives = 18/18 (100.00%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            IT+LLN+NITPCLPLRGT
Sbjct:  181 ITRLLNNNITPCLPLRGT 198
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.036e-17
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTES HTLP S TRAAMLVR+NTLLQGYSGI
Sbjct:  137 FGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGI 170

HSP 2 Score: 41.9726 bits (97), Expect = 7.036e-17
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKLLNHN+TPCLPLRGT
Sbjct:  178 ITKLLNHNVTPCLPLRGT 195
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 7.036e-17
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTES HTLP S TRAAMLVR+NTLLQGYSGI
Sbjct:  137 FGNGTESCHTLPQSGTRAAMLVRINTLLQGYSGI 170

HSP 2 Score: 41.9726 bits (97), Expect = 7.036e-17
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKLLNHN+TPCLPLRGT
Sbjct:  178 ITKLLNHNVTPCLPLRGT 195
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.146e-17
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTESSHTLPH+ATRAAMLVR+NTLLQGYSGI
Sbjct:  138 FGNGTESSHTLPHTATRAAMLVRINTLLQGYSGI 171

HSP 2 Score: 36.1946 bits (82), Expect = 9.146e-17
Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKLLN+N+TPCL LRGT
Sbjct:  179 ITKLLNNNVTPCLDLRGT 196
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL1_POPKI (Phenylalanine ammonia-lyase G1 OS=Populus kitakamiensis GN=PALG1 PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.190e-16
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTES+H LP SATRAAMLVR NTLLQGYSGI
Sbjct:  107 FGNGTESNHILPRSATRAAMLVRTNTLLQGYSGI 140

HSP 2 Score: 42.3578 bits (98), Expect = 1.190e-16
Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKLLNHNITPCLPLRGT
Sbjct:  148 ITKLLNHNITPCLPLRGT 165
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.610e-16
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTES+ TLPH+ATRAAMLVR+NTLLQGYSGI
Sbjct:  143 FGNGTESTQTLPHTATRAAMLVRINTLLQGYSGI 176

HSP 2 Score: 38.891 bits (89), Expect = 2.610e-16
Identity = 16/18 (88.89%), Postives = 16/18 (88.89%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            I K LNHNITPCLPLRGT
Sbjct:  184 IAKFLNHNITPCLPLRGT 201
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.610e-16
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNGTES+ TLPH+ATRAAMLVRVNTLLQGYSGI
Sbjct:  137 FGNGTESNCTLPHTATRAAMLVRVNTLLQGYSGI 170

HSP 2 Score: 39.6614 bits (91), Expect = 2.610e-16
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKLLN+NITPCLPLRGT
Sbjct:  178 ITKLLNNNITPCLPLRGT 195
[Close]
BLAST of CF510206 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.611e-16
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 2 
Query:    2 FGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGI 103
            FGNG ES HTLPHSATRAAMLVR+NTLLQGYSGI
Sbjct:  129 FGNGIESFHTLPHSATRAAMLVRINTLLQGYSGI 162

HSP 2 Score: 38.1206 bits (87), Expect = 2.611e-16
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 1 
Query:  127 ITKLLNHNITPCLPLRGT 180
            ITKL+N NITPCLPLRGT
Sbjct:  170 ITKLINSNITPCLPLRGT 187
The following BLAST results are available for this feature:
BLAST of CF510206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PAL1_LITER5.413e-1794.12Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL2_LITER5.414e-1794.12Phenylalanine ammonia-lyase 2 OS=Lithospermum eryt... [more]
PALY_POPTR7.035e-1791.18Phenylalanine ammonia-lyase OS=Populus trichocarpa... [more]
PAL3_TOBAC7.036e-1788.24Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PAL2_TOBAC7.036e-1788.24Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL1_SOYBN9.146e-1794.12Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL1_POPKI1.190e-1688.24Phenylalanine ammonia-lyase G1 OS=Populus kitakami... [more]
PAL2_CICAR2.610e-1688.24Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL2_PHAVU2.610e-1691.18Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_SOLLC2.611e-1691.18Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-721 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510206 ID=CF510206; Name=CF510206; organism=Citrus sinensis; type=EST; length=182bp
CTTTGGAAACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAA
GGGCAGCCATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGC
ATCCCGATTTGAAATCCTGGAAGCCGATCACAAAGCTGCTCAATCACAAC
ATCACTCCATGCCTCCCTCTTCGCGGCACAAT
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