CF510214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.013e-16 Identity = 38/73 (52.05%), Postives = 60/73 (82.19%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS-CMERILERYER 347 M RG++Q+KRIEN+ NRQVT+SKRR+GL KKA+E++VLCDA+V++I+ S+ GKL E+ + S +++ + Y++ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK 73
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.340e-15 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERY 350 M R R ++KRIE+ RQVTFSKRR GL KKA E+SVLCDA+VALIVFS+ GKL +++ S M I+++Y + Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSS-MNEIIDKYNTH 72
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.984e-15 Identity = 36/73 (49.32%), Postives = 59/73 (80.82%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYER 347 MGRG++++++IENK NRQVTFSKRR+G++KKA E++VLCDA+V+L++ S+ KL Y S ++++ + Y++ Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQK 73
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.648e-15 Identity = 35/70 (50.00%), Postives = 57/70 (81.43%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERY 341 MGRG++ +++I++ +RQVTFSKRR GL+KKA E+++LCDAEV LI+FS KL+++++ S ++ +ER+ Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSS-VKSTIERF 69
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.683e-15 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY--STDSCMERILERYE 344 MGRGR ++KRIEN RQ TF KRR GL KKA E++VLCDA++ L++FS GKL+ + T + +ERYE Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYE 73
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14 Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERY 341 M R R +++RIE+ RQVTFSKRR GL KKA E++VLCDA+VAL+VFS+ GKL ++++ S M I+++Y Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFAS-SNMNEIIDKY 69
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.533e-11 Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 3 Query: 135 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY---STDSCMERIL 332 GR ++++ +++N+ N QVTFSKRRSGL KKA E+ LC AEVA++VFS K+F + + DS ++R + Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFI 75
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.415e-11 Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 3 Query: 129 NMGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERY 341 ++GR ++ + +I+ + +RQVTFSKRR+GL KKA E+ LC AE+ +IVFS K F + S +E +L+RY Sbjct: 61 SIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPS-VESVLDRY 130
BLAST of CF510214 vs. ExPASy Swiss-Prot
Match: RLM1_YEAST (Transcription factor RLM1 OS=Saccharomyces cerevisiae GN=RLM1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.607e-11 Identity = 27/59 (45.76%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 132 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 308 MGR +++++RI + NR VTF KR++GL KKAHE+SVLC ++A+I+ + +E+S+ Sbjct: 1 MGRRKIEIQRISDDRNRAVTFIKRKAGLFKKAHELSVLCQVDIAVIILGSNNTFYEFSS 59 The following BLAST results are available for this feature:
BLAST of CF510214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF510214 ID=CF510214; Name=CF510214; organism=Citrus sinensis; type=EST; length=352bpback to top |