CF510223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_CANGA (Ribosome biogenesis protein YTM1 OS=Candida glabrata GN=YTM1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 179 NSRRVQVRFKTKLKPPQ-KVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 ++ +V+V+F T+ K V + P +L R+GLS +VN+LL++ P PFDFLI+GEL+R SL+++L KG+S+E L +EY +A Sbjct: 4 DTSQVKVKFFTREKDESLHVDDVPMYAPISLKRYGLSEIVNHLLESETPI----PFDFLIDGELLRTSLQEYLTKKGLSSETTLTVEYTRA 90
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_KLULA (Ribosome biogenesis protein YTM1 OS=Kluyveromyces lactis GN=YTM1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 188 RVQVRFKTKLKPPQ-KVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 +V++RF T+ + V I P +L R+GLS +VN+LL+ KS PFDFLI+GEL+R SL+ +L+ KG+S+E L +EY +A Sbjct: 7 QVKLRFFTREEDETLHVNDAPIYAPVSLKRYGLSEIVNHLLELP----KSMPFDFLIDGELLRTSLQDYLIKKGLSSETFLNVEYTRA 90
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_ASPTN (Ribosome biogenesis protein ytm1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ytm1 PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.826e-11 Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 185 RRVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 R+V+V+ +K + +P ++ I IP+ L R+ LS++VNNLL P PF+FLING +R S++++L A GISAE LEIEY++A Sbjct: 12 RQVRVQLTSK-QEDIALPEDTGPILIPTGLRRYALSTLVNNLLGNEKPI----PFEFLINGAFLRTSIDEYLTANGISAETTLEIEYVRA 96
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_YEAST (Ribosome biogenesis protein YTM1 OS=Saccharomyces cerevisiae GN=YTM1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 176 ENSRRVQVRFKTKLKPPQ-KVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 E+ +V++RF T+ K V + P +L R+GLS +VN+LL + P PFDFLI GEL+R SL +L KG+S+E L +EY +A Sbjct: 3 EDKSQVKIRFFTREKDELLHVQDTPMYAPISLKRYGLSEIVNHLLGSEKPV----PFDFLIEGELLRTSLHDYLTKKGLSSEASLNVEYTRA 90
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_YEAS7 (Ribosome biogenesis protein YTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=YTM1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 176 ENSRRVQVRFKTKLKPPQ-KVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 E+ +V++RF T+ K V + P +L R+GLS +VN+LL + P PFDFLI GEL+R SL +L KG+S+E L +EY +A Sbjct: 3 EDKSQVKIRFFTREKDELLHVQDTPMYAPISLKRYGLSEIVNHLLGSEKPV----PFDFLIEGELLRTSLHDYLTKKGLSSEASLNVEYTRA 90
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_ASPCL (Ribosome biogenesis protein ytm1 OS=Aspergillus clavatus GN=ytm1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 248 IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 I +P+ L R+ LS++VNNLL P PF+FLING +R S++++L A GISAE LEIEY++A Sbjct: 40 ILVPTGLRRYALSTLVNNLLSNDKPI----PFEFLINGTFLRTSIDEYLTANGISAETTLEIEYVRA 102
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_ASPFU (Ribosome biogenesis protein ytm1 OS=Aspergillus fumigatus GN=ytm1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 185 RRVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 R+V+V+ +K + +P N+ I +P++L R+ LS++VN LL P PF+FLING +R S++++L A GISAE LEIEY++A Sbjct: 18 RQVRVQLTSK-QEDIALPDNTGPILVPTSLRRYALSTLVNKLLGNDKPI----PFEFLINGTFLRTSIDEYLTANGISAETTLEIEYVRA 102
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: YTM1_ASPFC (Ribosome biogenesis protein ytm1 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=ytm1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.115e-11 Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 185 RRVQVRFKTKLKPPQKVPSNS--IAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 R+V+V+ +K + +P N+ I +P++L R+ LS++VN LL P PF+FLING +R S++++L A GISAE LEIEY++A Sbjct: 18 RQVRVQLTSK-QEDIALPDNTGPILVPTSLRRYALSTLVNKLLGNDKPI----PFEFLINGTFLRTSIDEYLTANGISAETTLEIEYVRA 102
BLAST of CF510223 vs. ExPASy Swiss-Prot
Match: WDR12_DICDI (Ribosome biogenesis protein WDR12 homolog OS=Dictyostelium discoideum GN=wdr12 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 36/101 (35.64%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 161 EDQNEENSRRVQVRFKTKLK-----PPQKVPSNSIAIPSNLTRFGLSSVVNNLLQAVNPEWKSEPFDFLINGELVRMSLEQFLLAKGISAEKVLEIEYIKA 448 E +N+ N+++V+ K K+K +V IA+P L R GLS V+++L + N S+PFDFLING+ +R +L++ + +S E+++ IEY++A Sbjct: 2 ESENKNNNKKVKEESKVKVKFITNDANIRVTDTPIAVPVRLGRLGLSEVIHHLREEENET--SKPFDFLINGKFIRTTLDKHIKNANLSEEQIITIEYLEA 100 The following BLAST results are available for this feature:
BLAST of CF510223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510223 ID=CF510223; Name=CF510223; organism=Citrus sinensis; type=EST; length=450bpback to top |