CF510246 | Citrus Genome Database

Overview


Name	CF510246
Unique Name	CF510246
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	341

Libraries


Library Name	Type
Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.495e-15
Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSL-SKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAAL-SNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            +++SFN L+G IP  L ++ + L+ L   +NQ+ G IP  LG++ +L  L L +N+L G +P +L      L ++S++NN+L G+IP   GQL +L +L LS+N   G IP
Sbjct:  590 VNVSFNKLSGRIPQGLNNMCTSLKILDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIP 700

HSP 2 Score: 78.9518 bits (193), Expect = 8.483e-15
Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELG-NIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L  S N + G IP+SLG L+ L  L L  NQL G+IP  LG  +  L  L +  N LTG +P +     +L+ + LS+NHL G IP     L NL +L L+NN+  G IP
Sbjct:  615 LDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDFVNLKNLTVLLLNNNNLSGPIP 724

HSP 3 Score: 72.4034 bits (176), Expect = 7.939e-13
Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSN--------NHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            L LS N+LTG IP SLG  + L+ L L++N L   IP E G++Q LE L +  N L+G LP  L NC++L+ + LSN        N + GE     G  ++L  +    N + G IP E+
Sbjct:  267 LDLSGNFLTGRIPESLGKCAGLRSLLLYMNTLEETIPLEFGSLQKLEVLDVSRNTLSGPLPVELGNCSSLSVLVLSNLYNVYEDINSVRGEADLPPG--ADLTSMTEDFNFYQGGIPEEI 384

HSP 4 Score: 70.8626 bits (172), Expect = 2.310e-12
Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L G +PS + SL+ L+ L L  N   GEIP  +  ++ LE L L+ N +TG+LP   +   NL  ++L  N + GEIP  +  L+ L IL L  N   G +P  +G
Sbjct:  132 LAGNLPSVIMSLTGLRVLSLPFNSFSGEIPVGIWGMEKLEVLDLEGNLMTGSLPDQFTGLRNLRVMNLGFNRVSGEIPNSLQNLTKLEILNLGGNKLNGTVPGFVG 237

HSP 5 Score: 70.8626 bits (172), Expect = 2.310e-12
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGS-LSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L+LS+N L G IP SLG  ++ L  L +  N L G+IP   G + +L+ L L  N L+G +P    N  NL  + L+NN+L G IP+     +  A+  +S+N+  G +P   G
Sbjct:  639 LNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDFVNLKNLTVLLLNNNNLSGPIPS---GFATFAVFNVSSNNLSGPVPSTNG 749

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.483e-15
Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            L +S N  +G IP  L  L  L+ + L  N   G IP  +  ++ LE + +  N L G +P+++S+CT L  ++LSNN L G IP  +G L  L  L LSNN   G IP EL
Sbjct:  464 LEISANNFSGVIPVKLCDLRDLRVIDLSRNSFLGSIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGIPPELGDLPVLNYLDLSNNQLTGEIPAEL 575

HSP 2 Score: 76.2554 bits (186), Expect = 5.498e-14
Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 2

Query:   17 NYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            N L G+IP S+     L  L++  N   G IP +L +++ L  + L  N   G++P+ ++   NL  + +  N L GEIP+ +   + L  L LSNN   G IPPELG
Sbjct:  445 NQLQGSIPPSISKARHLSQLEISANNFSGVIPVKLCDLRDLRVIDLSRNSFLGSIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGIPPELG 552

HSP 3 Score: 75.8702 bits (185), Expect = 7.181e-14
Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 2

Query:   35 IPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            IPS+LG+LS L DL+L  + L GEIP  + N+  LE L L  N LTG +P ++    ++  I L +N L G++P  IG L+ L    +S N+  G +P ++
Sbjct:  212 IPSTLGNLSNLTDLRLTHSNLVGEIPDSIMNLVLLENLDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKI 312

HSP 4 Score: 75.485 bits (184), Expect = 9.379e-14
Identity = 35/107 (32.71%), Postives = 61/107 (57.01%), Query Frame = 2

Query:   17 NYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            N  TGT+P +LG  S++ +  +  N+  GE+PP L   + L+ +    N+L+G +P +  +C +LN+I +++N L GE+P    +L    +   +NN   G IPP +
Sbjct:  349 NSFTGTLPRNLGKFSEISEFDVSTNRFSGELPPYLCYRRKLQKIITFSNQLSGEIPESYGDCHSLNYIRMADNKLSGEVPARFWELPLTRLELANNNQLQGSIPPSI 455

HSP 5 Score: 74.7146 bits (182), Expect = 1.600e-13
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L L+ N LTG IP S+G L  +  ++L+ N+L G++P  +GN+  L    +  N LTG LP  ++    L   +L++N   G +P  +    NL   K+ NNSF G +P  LG
Sbjct:  249 LDLAMNSLTGEIPESIGRLESVYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKIA-ALQLISFNLNDNFFTGGLPDVVALNPNLVEFKIFNNSFTGTLPRNLG 360

HSP 6 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 34/104 (32.69%), Postives = 56/104 (53.85%), Query Frame = 2

Query:   17 NYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            N L+G IP S G    L  +++  N+L GE+P     +        + N+L G++P ++S   +L+ + +S N+  G IP  +  L +L ++ LS NSF G IP
Sbjct:  397 NQLSGEIPESYGDCHSLNYIRMADNKLSGEVPARFWELPLTRLELANNNQLQGSIPPSISKARHLSQLEISANNFSGVIPVKLCDLRDLRVIDLSRNSFLGSIP 500

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14
Identity = 42/110 (38.18%), Postives = 69/110 (62.73%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSL-GSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L++  N   G IP+SL  +L +++++ L +N   G IP  +GN  ++E L L  N L+G++P  L   +NL+ ++L NN L G + + +G+LSNL  L +S+N F G+IP
Sbjct:  162 LNVYENSFHGLIPASLCNNLPRIREIDLAMNYFDGSIPVGIGNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIP 271

HSP 2 Score: 75.8702 bits (185), Expect = 7.181e-14
Identity = 41/114 (35.96%), Postives = 66/114 (57.89%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPEL-GNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L LS N  +G  PS + +L  L+ L ++ N  HG IP  L  N+  +  + L  N   G++P  + NC+++ ++ L++N+L G IP  + QLSNL++L L NN   G +  +LG
Sbjct:  139 LDLSSNDFSGLFPSLI-NLPSLRVLNVYENSFHGLIPASLCNNLPRIREIDLAMNYFDGSIPVGIGNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGALSSKLG 251

HSP 3 Score: 71.2478 bits (173), Expect = 1.769e-12
Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            + L+ NY  G+IP  +G+ S ++ L L  N L G IP EL  +  L  L L  N L+G L + L   +NL  + +S+N   G+IP    +L+ L      +N F G +P  L
Sbjct:  187 IDLAMNYFDGSIPVGIGNCSSVEYLGLASNNLSGSIPQELFQLSNLSVLALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIPDVFLELNKLWYFSAQSNLFNGEMPRSL 298

HSP 4 Score: 67.0106 bits (162), Expect = 3.336e-11
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            L L  N L+G + S LG LS L  L +  N+  G+IP     +  L       N   G +P +LSN  +++ +SL NN L G+I      ++NL  L L++NSF G IP  L
Sbjct:  235 LALQNNRLSGALSSKLGKLSNLGRLDISSNKFSGKIPDVFLELNKLWYFSAQSNLFNGEMPRSLSNSRSISLLSLRNNTLSGQIYLNCSAMTNLTSLDLASNSFSGSIPSNL 346

HSP 5 Score: 66.6254 bits (161), Expect = 4.357e-11
Identity = 49/116 (42.24%), Postives = 63/116 (54.31%), Query Frame = 2

Query:    8 LSF-NYLTGTIPSSLGSLSKLQDLK---LWLNQLHGEIP--PELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            LSF N     I S+L  L   Q+LK   L LN    E+P  P L   + L+ L +   +L GT+P  LSN  +L  + LS N L G IP W+G L++L  L LSNN+F G IP  L
Sbjct:  379 LSFSNSSIQNISSALEILQHCQNLKTLVLTLNFQKEELPSVPSL-QFKNLKVLIIASCQLRGTVPQWLSNSPSLQLLDLSWNQLSGTIPPWLGSLNSLFYLDLSNNTFIGEIPHSL 493

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.108e-14
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L+G +   LG L  LQ L+L+ N + G IP +LGN+  L +L L  N L+G +P+ L     L ++ L+NN L GEIP  +  +  L +L LSNN   G IP
Sbjct:   80 LSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIP 181

HSP 2 Score: 72.7886 bits (177), Expect = 6.079e-13
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIP 256
            L L  N +TGTIP  LG+L++L  L L+LN L G IP  LG ++ L  L L+ N L+G +P +L+    L  + LSNN L G+IP
Sbjct:   97 LELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIP 181

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.223e-14
Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = 2

Query:   53 SLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            ++ ++ ++K++  ++ G IP +L  ++ L  L L  N LTG+LP AL N T + W++   N L G IP  IG L++L +L +S+N+F G IP E+G
Sbjct:   96 TICRITNIKVYAMEVVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGLLTDLRLLSISSNNFSGSIPDEIG 191

HSP 2 Score: 75.0998 bits (183), Expect = 1.225e-13
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNN 307
            L L  N LTGTIPS++G  S L+ L L  N+LHG IP  L N++ L  LFL  N L G+LP       +L+ + +S N L G +P+W+  L NL +  ++NN
Sbjct:  295 LVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKGQ--SLSNVDVSYNDLSGSLPSWV-SLPNLNLNLVANN 393

HSP 3 Score: 69.3218 bits (168), Expect = 6.721e-12
Identity = 35/113 (30.97%), Postives = 62/113 (54.87%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L+L  N LTG++P +LG+L++++ +   +N L G IP E+G +  L  L +  N  +G++P  +  CT L  I + ++ L G +P     L  L    +++    G+IP  +G
Sbjct:  127 LNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGLLTDLRLLSISSNNFSGSIPDEIGRCTKLQQIYIDSSGLSGGLPVSFANLVELEQAWIADMELTGQIPDFIG 239

HSP 4 Score: 66.6254 bits (161), Expect = 4.357e-11
Identity = 33/102 (32.35%), Postives = 56/102 (54.90%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            + G+IP  L +L  L +L L  N L G +PP LGN+  +  +    N L+G +P  +   T+L  +S+S+N+  G IP  IG+ + L  + + ++   G +P
Sbjct:  110 VVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGLLTDLRLLSISSNNFSGSIPDEIGRCTKLQQIYIDSSGLSGGLP 211

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.223e-14
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            ++LS + +TG IP  + +L +LQ+L+L  NQ+ GEIP E+  ++ L  L +  N+LTG LP    N TNL     SNN L G++ + +  L NL  L +  N   G IP E G
Sbjct:  202 VYLSNSSITGKIPEGIKNLVRLQNLELSDNQISGEIPKEIVQLKNLRQLEIYSNDLTGKLPLGFRNLTNLRNFDASNNSLEGDL-SELRFLKNLVSLGMFENRLTGEIPKEFG 313

HSP 2 Score: 73.9442 bits (180), Expect = 2.729e-13
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L LS N  +G++P  +   + L  + L +N+  G +P   G ++ L +L LD N L+G +P +L  CT+L  ++ + N L  EIP  +G L  L  L LS N   G IP
Sbjct:  441 LDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLGLCTSLVDLNFAGNSLSEEIPESLGSLKLLNSLNLSGNKLSGMIP 549

HSP 3 Score: 71.2478 bits (173), Expect = 1.769e-12
Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L +S N L+G IPS +  L  LQ L L  N   G +  ++GN ++L +L L  N  +G+LP  +S   +L  ++L  N   G +P   G+L  L+ L L  N+  G IP  LG
Sbjct:  393 LRVSNNSLSGMIPSGIWGLPNLQFLDLASNYFEGNLTGDIGNAKSLGSLDLSNNRFSGSLPFQISGANSLVSVNLRMNKFSGIVPESFGKLKELSSLILDQNNLSGAIPKSLG 505

HSP 4 Score: 68.1662 bits (165), Expect = 1.497e-11
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L L  N LTG +P  LGS +  + + +  N L G+IPP +     +  L +  N  TG  P + + C  L  + +SNN L G IP+ I  L NL  L L++N F G +  ++G
Sbjct:  321 LSLYRNQLTGKLPRRLGSWTAFKYIDVSENFLEGQIPPYMCKKGVMTHLLMLQNRFTGQFPESYAKCKTLIRLRVSNNSLSGMIPSGIWGLPNLQFLDLASNYFEGNLTGDIG 433

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.210e-14
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPS-SLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L L    L G IPS SLG L++L+ L L  N+L G+IP +  N+  L +L+L  NE +G  P + +   NL  + +S+N+  G IP  +  L++L  L L NN F G +P
Sbjct:   71 LRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLP 180

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.210e-14
Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = 2

Query:   53 SLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            ++ ++ ++K++   + G IPPEL  +  L  L L  N LTG+LP A+ N T + W++   N L G +P  IG L++L +L +S+N+F G IP E+G
Sbjct:   97 TICRITNIKVYAIDVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIG 192

HSP 2 Score: 69.707 bits (169), Expect = 5.146e-12
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNN 307
            L L  N LTGTIPS++G  S L+ + L  N+LHG IP  L N+  L  LFL  N L G+ P       +L  + +S N L G +P+W+  L +L +  ++NN
Sbjct:  296 LVLRNNNLTGTIPSTIGEHSSLRQVDLSFNKLHGPIPASLFNLSQLTHLFLGNNTLNGSFPT--QKTQSLRNVDVSYNDLSGSLPSWV-SLPSLKLNLVANN 394

HSP 3 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 33/102 (32.35%), Postives = 57/102 (55.88%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            + G IP  L +L+ L +L L  N L G +PP +GN+  ++ +    N L+G +P  +   T+L  + +S+N+  G IP  IG+ + L  + + ++   GRIP
Sbjct:  111 VVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIP 212

HSP 4 Score: 65.855 bits (159), Expect = 7.431e-11
Identity = 33/113 (29.20%), Postives = 61/113 (53.98%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L+L  N LTG++P ++G+L+++Q +   +N L G +P E+G +  L  L +  N  +G++P  +  CT L  + + ++ L G IP     L  L    +++     +IP  +G
Sbjct:  128 LNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIPLSFANLVQLEQAWIADLEVTDQIPDFIG 240

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.181e-14
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328
            L+G +   LG L  LQ L+L+ N + G +P +LGN+  L +L L  N  TG +P +L     L ++ L+NN L G IP  +  +  L +L LSNN   G +P
Sbjct:   84 LSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVP 185

HSP 2 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNN 307
            L L  N +TG +PS LG+L+ L  L L+LN   G IP  LG +  L  L L+ N LTG +P +L+N   L  + LSNN L G +P   G  S    +  +NN
Sbjct:  101 LELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPD-NGSFSLFTPISFANN 201

[Close]

BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.379e-14
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L LS NYL+G +  +L +LS L+ L +  N+    IP   GN+  LE L +  N+ +G  P +LS C+ L  + L NN L G I       ++L +L L++N F G +P  LG
Sbjct:  237 LSLSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSINLNFTGFTDLCVLDLASNHFSGPLPDSLG 349

HSP 2 Score: 74.3294 bits (181), Expect = 2.089e-13
Identity = 39/108 (36.11%), Postives = 56/108 (51.85%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRI 325
            LH+  N LTG +P  L S+ +L+ L L  N L GE+   L N+  L++L +  N  +  +P    N T L  + +S+N   G  P  + Q S L +L L NNS  G I
Sbjct:  213 LHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSI 320

HSP 3 Score: 71.633 bits (174), Expect = 1.354e-12
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 2

Query:   23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            L G I  SLG L++L+ L L  NQL GE+P E+  ++ L+ L L  N L+G++   +S    +  +++S+N L G++   +G    L +L +SNN F G I PEL
Sbjct:   76 LEGVISKSLGELTELRVLDLSRNQLKGEVPAEISKLEQLQVLDLSHNLLSGSVLGVVSGLKLIQSLNISSNSLSGKLSD-VGVFPGLVMLNVSNNLFEGEIHPEL 179

HSP 4 Score: 70.0922 bits (170), Expect = 3.940e-12
Identity = 42/112 (37.50%), Postives = 57/112 (50.89%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337
            L LS N L G +         +Q L +  N+L G++P  L +I+ LE L L  N L+G L   LSN + L  + +S N     IP   G L+ L  L +S+N F GR PP L
Sbjct:  189 LDLSMNRLVGNLDGLYNCSKSIQQLHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSL 300

HSP 5 Score: 67.781 bits (164), Expect = 1.956e-11
Identity = 46/143 (32.17%), Postives = 67/143 (46.85%), Query Frame = 2

Query:    2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETL------FLDFNELTGTLPAALSNCTNLNWISLSNNHLG------------------------GEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340
            L L+ N+ +G +P SLG   K++ L L  N+  G+IP    N+Q+L  L      F+DF+E    L     +C NL+ + LS N +G                        G+IP+W+     L +L LS N FYG IP  +G
Sbjct:  333 LDLASNHFSGPLPDSLGHCPKMKILSLAKNEFRGKIPDTFKNLQSLLFLSLSNNSFVDFSETMNVL----QHCRNLSTLILSKNFIGEEIPNNVTGFDNLAILALGNCGLRGQIPSWLLNCKKLEVLDLSWNHFYGTIPHWIG 471

The following BLAST results are available for this feature:

BLAST of CF510246 vs. ExPASy Swiss-Prot

BLAST of CF510246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89


Match Name	E-value	Identity	Description
RPK2_ARATH	6.495e-15	39.64	LRR receptor-like serine/threonine-protein kinase ...	[more]
HSL2_ARATH	8.483e-15	40.18	LRR receptor-like serine/threonine-protein kinase ...	[more]
PSKR1_DAUCA	1.108e-14	38.18	Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR...	[more]
BAK1_ARATH	1.108e-14	41.18	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]
Y5614_ARATH	3.223e-14	38.54	Probable LRR receptor-like serine/threonine-protei...	[more]
IKU2_ARATH	3.223e-14	39.82	Receptor-like protein kinase HAIKU2 OS=Arabidopsis...	[more]
Y2267_ARATH	4.210e-14	39.09	Probable inactive receptor kinase At2g26730 OS=Ara...	[more]
Y1561_ARATH	4.210e-14	38.54	Probable LRR receptor-like serine/threonine-protei...	[more]
SERK2_ARATH	7.181e-14	38.24	Somatic embryogenesis receptor kinase 2 OS=Arabido...	[more]
PSKR2_ARATH	9.379e-14	37.17	Phytosulfokine receptor 2 OS=Arabidopsis thaliana ...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_125000-761 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-9_H12 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF510246 ID=CF510246; Name=CF510246; organism=Citrus sinensis; type=EST; length=341bp
ACTCCATTTAAGCTTCAACTATCTTACTGGAACTATTCCTTCAAGCTTGG
GGTCTCTCTCCAAACTTCAGGATTTGAAGCTTTGGTTGAATCAGCTCCAT
GGAGAGATCCCACCAGAGCTTGGCAACATTCAGACACTGGAAACTCTGTT
TCTTGACTTTAACGAGTTGACGGGAACCTTGCCTGCTGCTTTGAGCAACT
GCACCAATCTTAATTGGATCTCATTGTCGAATAATCATTTGGGTGGTGAA
ATTCCCACTTGGATTGGCCAGCTTTCGAACCTCGCCATTCTCAAACTCAG
CAACAACTCCTTTTATGGTAGGATCCCTCCGGAGCTTGGAG