CF510246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.939e-13 Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 8 LSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337 LS N TG+IP SLG+LS L D+ L N L GE+P N+ L L + N ++GTLP ++ N L + + NN L G + G L L + NN F G IP +L Sbjct: 127 LSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPSMENLLTLTTLRVQNNQLSGTLDVLQG--LPLQDLNIENNLFSGPIPDKL 234
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.939e-13 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328 + L++NY+ GT+P S S L + L +N+L GEIP E GN +L L L+ N +GT+P L N +L + LS+N L G +P + +L N+ ++++ G IP Sbjct: 128 IDLAYNYINGTLPREWAS-SNLTFISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234 HSP 2 Score: 68.5514 bits (166), Expect = 1.146e-11 Identity = 42/109 (38.53%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328 + L N L+G IP G+ S L L L N G IP ELGN+ L+ L L N+LTGTLPA+L+ N+ +++ L G IP++I L L++ + G IP Sbjct: 151 ISLLVNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIP 258 HSP 3 Score: 66.6254 bits (161), Expect = 4.357e-11 Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALS------------------------NCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328 L LS N LTGT+P+SL L + D ++ QL G IP + N + LE L + + LTG +P+ +S N T L I L N ++ G+IPT++ L L L LS N G IP Sbjct: 198 LLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQLERLEMIASGLTGPIPSVISVLSNLVNLRISDIRGPVQPFPSLKNVTGLTKIILKNCNISGQIPTYLSHLKELETLDLSFNKLVGGIP 330
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340 L LS N +T ++PS L SLS L+ L L N++ +P +GN +L TL L FN ++G +PAA+SN NL + L NN +P + +L + LS+N +P G Sbjct: 95 LDLSGNKIT-SLPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLPVGFG 206
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.354e-12 Identity = 46/114 (40.35%), Postives = 61/114 (53.51%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGE--IPTWIGQLSNLAILKLSNNSFYGRIPPEL 337 L LS N +GT+P+S G L L L L N L G +P ELG ++ L L L N +G L + N +L + LSNN +G E + T G++SNL +L LS G IP L Sbjct: 220 LDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEEDMVGTNWGKMSNLVVLDLSKMGLRGEIPTSL 333 HSP 2 Score: 71.2478 bits (173), Expect = 1.769e-12 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340 L G +P ++G+L+KL+ L + N GE+P + N++ L+ L N G +P L + LS N G +PT G L +L L LSNN G +P ELG Sbjct: 155 LIGELPETIGNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNNLLEGNLPQELG 260
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.310e-12 Identity = 45/112 (40.18%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPEL 337 L LS N TGTIP SL SL L + L N L G+IP ++ + + L N L+G LP ++ N + L + L NNHL GE+ + Q L L + NN F G IP +L Sbjct: 127 LFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELD--VLQDLPLKDLNVENNLFNGPIPEKL 236
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.310e-12 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIP 328 L L L+G + L L LQ L+L+ N + GEIP ELG++ L +L L N ++G +P++L L ++ L NN L GEIP + L L +L +SNN G IP Sbjct: 75 LDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISNNRLSGDIP 182
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.017e-12 Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQ-LSNLAILKLSNNSFYGRIP 328 LTG I ++ L L+ L+L L G +P L ++ L L L FN LTG +P++LS NL + L N L G IP GQ + N+ L LS+N G IP Sbjct: 107 LTGPIQPAIAKLKGLKSLRLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIPISFGQFIGNVPDLYLSHNQLSGNIP 209
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 3.017e-12 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 2 LHLSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQ-TLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSF 313 + LSFN L+G+IPSSL SL KL+ L+L N+L G IP G + +LFL N+L+GT+P +L N + I LS N L G+ G I+ +S N F Sbjct: 148 IDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQLSGTIPKSLGN-PDFYRIDLSRNKLQGDASILFGAKKTTWIVDISRNMF 251 HSP 2 Score: 67.0106 bits (162), Expect = 3.336e-11 Identity = 41/107 (38.32%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 23 LTGTIPSSLGSLSKLQDLKLW-LNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340 ++G IP +G L L L L L G I P + ++ L L L + LTG +P LS NL +I LS N L G IP+ + L L L+LS N G IP G Sbjct: 82 ISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFG 188
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.721e-12 Identity = 43/115 (37.39%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 8 LSFNYLTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNI-QTLETLFLDFNELTGTLPAAL---SNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340 L+ N L+G+IP LG S L D+ L N L G +PP + N+ L + + N L+G LP S C NL + L N GE P +I + + L LS+N F G +P LG Sbjct: 130 LNINSLSGSIPLELGYTSSLSDVDLSGNALAGVLPPSIWNLCDKLVSFKIHGNNLSGVLPEPALPNSTCGNLQVLDLGGNKFSGEFPEFITRFKGVKSLDLSSNVFEGLVPEGLG 244
BLAST of CF510246 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 23 LTGTIPSSLGSLSKLQDLKLW-LNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLSNLAILKLSNNSFYGRIPPELG 340 L+G IP ++G L L+ L L+ L G+IPP + ++ L+ + L + L+G +PA S NL ++ LS N+L G IP + L NL L L N G IP G Sbjct: 85 LSGQIPDAVGDLPFLETLIFRKLSNLTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFG 191 HSP 2 Score: 65.4698 bits (158), Expect = 9.705e-11 Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 23 LTGTIPSSLGSLSKLQDLKLWLNQLHGEIPPELGNIQTLETLFLDFNELTGTLPAALSNCTNLNWISLSNNHLGGEIPTWIGQLS-NLAILKLSNNSFYGRIP 328 LTG IP ++ L L+ ++L L G +P ++ L L L FN L+G +P +LS NL + L NHL G IP G+ + + L LS+N G+IP Sbjct: 110 LTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIPDSFGKFAGSTPGLHLSHNQLSGKIP 212 The following BLAST results are available for this feature:
BLAST of CF510246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510246 ID=CF510246; Name=CF510246; organism=Citrus sinensis; type=EST; length=341bpback to top |