CF831924

Overview
NameCF831924
Unique NameCF831924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:521..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 70/203 (34.48%), Postives = 103/203 (50.74%), Query Frame = -2
Query:  238 LATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVL-SGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 840
            LATRDSV+        + V TGRRDG  S     D+ LP P    S   + F  +G+   D+V L  GGH++GV+HC+ F +RL         D +++P   + L+ KC S  D TT   LD  +    D+  Y      +G+ + D  L  ++    IV    + +  F + FA+++ +MG + VLTG  GEIR+ C V NN
Sbjct:  122 LATRDSVALA--GGPRFSVPTGRRDGLRS--NPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL--------SDRAMEPSLKSSLRRKCSSPNDPTTF--LDQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFNN 310          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 66/203 (32.51%), Postives = 98/203 (48.28%), Query Frame = -2
Query:  238 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQDKFFPE-FAQSMKRMGAMNVLTGTQGEIRKKCSVINN 843
            A+A RD V      P  W VL GRRD + S  ++   L P P ++   L   ++ K L   D+V LSG HTIG + C+ F+  +YN       D +++  +A  LK  C  ++  ++ A LD  +   F + YY   +  KGL  SD  L  N    + V    +    F   F  +M +MG +  LTGT G+IR  C  +N+
Sbjct:  129 AVAARDGV-VALGGPS-WTVLLGRRDSTGSFPSQTSDL-PPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKANC-PMSGGSSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDSTVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTCWKLNS 320          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 64/206 (31.07%), Postives = 100/206 (48.54%), Query Frame = -2
Query:  241 LATRDSVSFQFQKPDLWEVLTGRRDG-SVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAEL----DPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 840
            LA RD+V+       L  V  GR+D  S      AD  LP   A+       F +KG+T+++ V + G HTIGV+HC   +N L  F        ++DPR+  FL+  C   + T+  AE     +  +   FD+ YYD  I  +G  + D+ +  +   R  V     +QD+FF  F+ +  ++ +  VLTG +G IR  C  ++
Sbjct:  139 LAARDAVALT--GGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC---NNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCDKVD 339          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 61/202 (30.20%), Postives = 94/202 (46.53%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRN-QDKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RD+  F+      + +  GR+D   +    A+  LP+PF N S     F DKG   +++VVL+G HT+G S C                  +L+   +A L+  C + A+ T    LDP S   FD  Y++  ++ +GL  SD  L+ +      V   R+    F  +FA +M +M  +    G Q EIR  CS +N
Sbjct:  161 AIAARDA--FRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAVLCT-----------STNLNQNRSATLQCTCPASANDTGLVGLDP-SPGTFDKKYFEELVKGQGLLFSDQELMQSNATVTAVRRYRDATGAFLTDFAAAMVKMSNLPPSAGVQLEIRNVCSRVN 348          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.020e-15
Identity = 62/202 (30.69%), Postives = 95/202 (47.03%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV+    +   + V  GR D   +    A   LP+PF N +   + FNDK  T++++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD    N+G+  SD  L  +      V +  N    F  +FA +M +MG +    G Q EIR  CS +N
Sbjct:  171 AIAARDSVAKLGGQT--YNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 356          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.445e-15
Identity = 60/195 (30.77%), Postives = 96/195 (49.23%), Query Frame = -2
Query:  241 WEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDP---RYAAFLKTKCKSLA---DTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNK---GARNIVMELRNQD-KFFPEFAQSMKRMG-AMNVLTGTQGEIRKKCSVIN 792
            W+V  GR+D   +    A   LP+P      +   F  +GL+V+D+V L G HTIG + C  F +R+Y   G+     +L+P    Y A L+  C + +   D+  TA +D  +   FD+  Y   +  +GL  SD  + T+      R IV +       FF +F++SM +MG  +N  +   GE+R+ C  +N
Sbjct:  145 WDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY---GDFQVTSALNPVSETYLASLREICPASSGEGDSNVTA-IDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.876e-15
Identity = 61/202 (30.20%), Postives = 97/202 (48.02%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDSV+    +   + V  GR D   +  + A   LP+PF N +   + F+DK  T++++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD    N+G+  SD  L  +      V +  N  + F  +FA +M +MG +    G Q EIR  CS +N
Sbjct:  172 AIAARDSVAKLGGQT--YSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPTMFDKVYYDNLNSNQGIMFSDQVLTGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVN 357          
BLAST of CF831924 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14
Identity = 61/202 (30.20%), Postives = 95/202 (47.03%), Query Frame = -2
Query:  241 ALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDIFIENKGLFQSDAALLTNKGARNIVMELRNQ-DKFFPEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 843
            A+A RDS++    +   + V  GR D + +  + A   LP+P  N +   + F+DK  TV+++V L+G HT+G + C+           +G+ +P      AA L+  C +    +   +LD  +   FD  YYD    N+G+  SD  L  N      V    N    F  +FA +M +MG +    G Q EIR  CS +N
Sbjct:  171 AIAARDSLAKLGGQT--YTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARCS-------TVCTSGNVNP------AAQLQCNCSATLTDSDLQQLDT-TPAVFDKVYYDNLNNNQGIMFSDQVLTGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVN 356          
The following BLAST results are available for this feature:
BLAST of CF831924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER44_ARATH1.035e-1934.48Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER42_MAIZE1.352e-1932.51Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER29_ARATH5.678e-1831.07Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PERN_IPOBA4.807e-1730.20Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PERX_SOLTU2.020e-1530.69Suberization-associated anionic peroxidase OS=Sola... [more]
PER11_ARATH3.445e-1530.77Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER1_SOLLC5.876e-1530.20Suberization-associated anionic peroxidase 1 OS=So... [more]
PER2_SOLLC3.809e-1430.20Suberization-associated anionic peroxidase 2 OS=So... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01A09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831924 ID=CF831924; Name=CF831924; organism=Citrus sinensis; type=EST; length=844bp
TTTTTTTTTTTTTTTTTAACCCAGTCAAATTAATTCCCTTAAAAAGGGAG
CTGGTAGTTATAAACGTACAGCCTATCAATGATACAAATTAAGGCTTCAG
CTGCACAAACACACCCACATCCTTAATTTATTCCGGGGTACAATTATCAA
CAGATCTTAACAAACCCACAAGCCCAGCAGCAGACTAAATTGGCAATTAC
ATTGACATCAGATAGATGAATGCAACAAACTATCTGGATTATTAATAACA
CTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGTGAGAACATTCATAGC
TCCCATTCTCTTCATTGACTGAGCAAACTCGGGGAAAAACTTATCTTGGT
TTCTCAACTCCATGACAATGTTTCTTGCTCCCTTATTGGTTAAAAGAGCA
GCATCAGATTGGAATAGACCCTTGTTCTCGATAAAAATATCATAGTAATG
GCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATTCGGCAGTAGTCGTTG
TGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAATGCAGCGTATCGTGGG
TCCAATGAAGGATCTTGATCTCCATTTCCTGTGAAATTGTAAAGCCTGTT
GCTGAAAAAGGTGCAGTGCGAAACTCCGATTGTGTGGCCACCTGAAAGGA
CTACAAGATCTTTGACAGTGAGACCTTTGTCGTTAAAATTTTTCTTGAGT
TCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAGATCGGCCTCAGCAGC
TATGGACACACTGCCATCTCTTCTACCGGTGAGCACTTCCCACAGGTCCG
GTTTTTGAAATTGGAATGAAACAGAATCCCTTGTAGCCAATGCT
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