CF831926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJB (ATP synthase gamma chain OS=Synechococcus sp. GN=atpG PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.093e-26 Identity = 61/112 (54.46%), Postives = 79/112 (70.54%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRL G+ V R V M+FEQDP QILDA++PLY+N+Q+LRA QE+ ASE+AARM+ M+ +DNA EL + L +AYN+ RQ IT E+LE+VAGAEAL Sbjct: 203 DEIFRLLVRGGEFTVERSKVIAAVSAPPQDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNASELIRTLGLAYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_TRIEI (ATP synthase gamma chain OS=Trichodesmium erythraeum (strain IMS101) GN=atpG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.355e-25 Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRLT G+ V+R++V+ M+FEQDP QILDA++PL++ +Q+LRA+QES ASE+A+RM+ MS +DNA EL L++AYN+ RQ IT E+LE+V GA AL Sbjct: 203 DEIFRLTSKGGEFEVSRETVSAAVKSFPRDMIFEQDPIQILDALLPLFLTNQLLRAWQESSASELASRMTAMSNASDNASELAGTLTLAYNKARQAAITQEILEVVGGANAL 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP8 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 8801) GN=atpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.075e-25 Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRL +GK+ V R+++ M+FEQDP QILDA++PLY+N+Q+LR QE+ ASE+AARM+ MS +DNA +L L+++YN+ RQ IT +L+E+VAGA AL Sbjct: 203 DEVFRLITRDGKLRVERETIAQEVSSFPQDMIFEQDPIQILDALLPLYINNQLLRGLQEAAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQQLMEVVAGANAL 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_ACAM1 (ATP synthase gamma chain OS=Acaryochloris marina (strain MBIC 11017) GN=atpG PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.851e-25 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRLT G+ V R+ + + P M+FEQ+P QILDA++PLY+N+Q+LRA QES ASE+AARM+ M+ +DNA EL L+++YN+ RQ IT ELLE+V GAEAL Sbjct: 204 DEVFRLTTRGGQFQVERERMERGTPQEMPSDMIFEQNPIQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNASELIGTLTLSYNKARQAAITQELLEVVGGAEAL 316
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROMT (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL2A) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE+FRLT + ++I+ +D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRA QES ASE+A+RM+ M+ +DNA EL KNL++ YN+ RQ IT E+LE+V GA A Sbjct: 205 DEIFRLTTKDSQLIIEKDAAPSNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PROM1 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL1A) GN=atpG PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = -1 Query: 237 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEA 569 DE+FRLT + ++I+ +D+ N+ P ++FEQ P Q+L+A++PLY+ +Q+LRA QES ASE+A+RM+ M+ +DNA EL KNL++ YN+ RQ IT E+LE+V GA A Sbjct: 205 DEIFRLTTKDSQLIIEKDAAPTNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP2 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.441e-24 Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE F L GK V R+ V EL M+FEQDP IL+A++PLY+++Q+LRA QE ASE+AARM+ M+ +DNA +L K L+++YN+ RQ IT EL E+VAGA AL Sbjct: 203 DETFNLITRGGKFQVEREKVATEVKELPADMIFEQDPKDILNALLPLYLSNQLLRALQEGAASELAARMTAMNNASDNASDLMKTLTLSYNKARQAAITQELSEVVAGANAL 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FRL GK V R+ V M+FEQDP QIL+A++PLY +Q+LRA QES ASE+AARM+ MS +DNA +L L+++YN+ RQ IT ELLE+VAGA +L Sbjct: 203 DEIFRLITRGGKFQVEREKVEAPVESFPQDMIFEQDPVQILEALLPLYNTNQLLRALQESAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQELLEVVAGANSL 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_SYNR3 (ATP synthase gamma chain OS=Synechococcus sp. (strain RCC307) GN=atpG PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.878e-23 Identity = 52/112 (46.43%), Postives = 79/112 (70.54%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+FR EG++ V R S + + +L ++FEQ P+Q+LD ++PLY+ +Q+LR+ QES ASE+A+RM+ M+ +DNA L K L++ YN+ RQ IT E+LE+V GA A+ Sbjct: 203 DEIFRFVTKEGELGVERSSASNQEDKLKSDLVFEQSPSQLLDVLLPLYLQNQVLRSLQESAASELASRMTAMNNASDNAKALAKELTLDYNKARQAAITQEILEVVGGASAM 314
BLAST of CF831926 vs. ExPASy Swiss-Prot
Match: ATPG_PHATR (ATP synthase gamma chain, chloroplastic OS=Phaeodactylum tricornutum GN=ATPC PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.375e-23 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = -1 Query: 234 DELFRLTPNEGKMIVARDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRAFQESFASEVAARMSPMSIVTDNADELKKNLSVAYNQERQGKITGELLEIVAGAEAL 569 DE+F+LT G+ V R + + P M+FEQDP QI++A++PLY+N QILR QES ASE+AARM M +DNA L K L++ YN+ RQ +T ELLEI++GA AL Sbjct: 257 DEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIISGASAL 369 The following BLAST results are available for this feature:
BLAST of CF831926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 412
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831926 ID=CF831926; Name=CF831926; organism=Citrus sinensis; type=EST; length=569bpback to top |