CF831954

Overview
NameCF831954
Unique NameCF831954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 56/243 (23.05%), Postives = 110/243 (45.27%), Query Frame = 3
Query:  117 KSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGK-PIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPV--LSWFD--IQGIERKAKKISLWFENIINSTVEKY 830
            K +++   LPP P  LP +G L  +G    H+ F  L    G +  L LG     V+SS    ++V+R  D     R   +   + + G  D+ ++ YG EW + R+F VG++  +  L +   +++ E    ++ L  +++ + + P+D+ +        ++  + +G++    E   T+   EL F   E     G+   SD FP+  L W    I G  ++   + L  + ++   ++ +
Sbjct:   22 KIKRSIWNLPPSPPKLPVIGNLHQVGELP-HRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL--SESAVDQSPVDLSKTLFWLAASILFRVAFGQSFHESEFTDTDKIDELVF---ETETAQGSFTCSDFFPIAGLGWLVDWISGQHKRLNDVFLKLDALLQHVIDDH 258          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12
Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 3
Query:   45 SNDTAIITCLVSVLAVAYFA-WNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKM 455
            S    I+  LVSVLA+ +   W + + R+     PPGP   P +G    +G    H  F  L   YG +F++ LG+   VV++  S + Q +  Q   FADR PP A      GG  +A+ +Y   W + R+   G M
Sbjct:   17 STQQTILLLLVSVLAIVHLGQWLLRQWRRKPWSSPPGPFPWPLIGNAASVGRAS-HLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGGVFADR-PPFASFRVVSGGRSLAFGHYSERWKERRRAAYGTM 152          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 3
Query:   72 LVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRK-----FFVGKMM 458
            L+ + A A  A  V+K R    KLPPGP G P  G    +G     +K   L   +G ++ L +G +  VVVSSP + K+V+  Q   F  R   +   + T  G D+ ++ Y   W K+R+     FF  K++
Sbjct:   10 LLGLFAAAVVAIAVSKLRGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVV 143          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CY250_MOUSE (Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 63/214 (29.44%), Postives = 94/214 (43.93%), Query Frame = 3
Query:  105 WNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTP--NISDVFPVL 740
            W  +  R    KLPPGP  LP +G +  +   D+ + FT L  VYGP++ L+LGNK  VV+     VK+ + D    FA R        AT  G  I +S  G  W   R+F +  + +          R QE    + +     N  G P D   +       VI +I++ +  + ++    N    L  KL E+  +M TP   + + FPVL
Sbjct:   20 WRQSSER---GKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPVYTLYLGNKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKAT-NGMGIIFSK-GNVWKNTRRFSLTTLRNLGMGKRSIEDRVQEEARCLVEELRKTN--GSPCDPTFILGCAPCNVICSIIFQDRFDYKDRDFLN----LMEKLNEITKIMSTPWLQVCNTFPVL 222          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 64/239 (26.78%), Postives = 115/239 (48.12%), Query Frame = 3
Query:   45 SNDTAIITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRK--QEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTP--NISDVFP-VLSW 746
            S  TAI+  L++++ +      +  S +   KLPPGPR LP +G L  L + D+    T+L   YG ++ + LG +  VV+S    VK+ + DQ   F+ R    A    T  GN IA+SN G  W  LR+F + +++ N  +       +  +E    + +L   + +   P  +   S+S ++C   ++L+G   +  +E +  +   +     +   +M +P   + D+FP +L W
Sbjct:    3 SVSTAILLLLLALICLL-----LTLSSRDKGKLPPGPRPLPLLGNLLLLRSQDMLTSLTKLSKEYGSMYTVHLGPRRVVVLSGYQAVKEALVDQGEEFSGRRDFPAFFNFT-KGNGIAFSN-GDRWKVLRRFSI-QILRNFGMGKRSIEERILEEGSFLLAELRKTEGEPFDPTFVLSRSVSNIIC---SVLFGSRFDYDDERLLTIIRHIN----DNFQIMSSPWGELYDIFPSLLDW 226          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP2A9_MESAU (Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP2A9 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 64/238 (26.89%), Postives = 108/238 (45.38%), Query Frame = 3
Query:   72 LVSVLA-----VAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRD-----LYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWFDI 755
            LV++LA     V  F W     +K   KLPPGP  LP +G    L T D++   TEL   YGP+F ++LG +  VV+     VK+ + DQ   F+ R    A     F    +A+S+ G    +LR+F +  +         + + K+ V+  I++     +    +  G PID  +    T+  VI ++++G+A +  ++           +  EL+ +M   N     PV   +D+
Sbjct:    8 LVAILAYLSVMVLVFVWK----QKFRGKLPPGPTPLPYIGNYLQLNTKDIYSSITELSERYGPVFTIYLGPRPVVVLYGYDAVKEALVDQAEEFSGRGEQ-ATYNTLFKDYGVAFSS-GERAKQLRRFSIATLRD-------FGVGKRGVEERIQEEAAYLIKMLRSTRGAPIDPNDYLSQTVSNVISSVVFGDAFDYEDK-----------EFLELLHMMNEMNKFAASPVGQLYDM 221          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP18A_DROME (Cytochrome P450 18a1 OS=Drosophila melanogaster GN=Cyp18a1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 66/249 (26.51%), Postives = 106/249 (42.57%), Query Frame = 3
Query:   24 LRVDDASSNDTAIITCLVSVLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKM-------MSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWF 749
            L+V         ++  L  +  V    W V   R+   KLPPGP GLP +GYL F+G ++ H +F EL   YG +F   LG++L VV+S   ++++  R ++ T      P    + T  G  I  ++ G  W   R+F   K+       M N        +   EV   I  L+ +D   G+P+D+  +    +  VI +++      I +           F + E M L G  +  D  P +  F
Sbjct:   15 LQVQQDGDAQHLLMVFLGLLALVTLLQWLVRNYRELR-KLPPGPWGLPVIGYLLFMG-SEKHTRFMELAKQYGSLFSTRLGSQLTVVMSDYKMIRECFRREEFT----GRPDTPFMQTLNGYGII-NSTGKLWKDQRRFLHDKLRQFGMTYMGNGKQQMQKRI-MTEVHEFIGHLHASD---GQPVDMSPVISVAVSNVICSLMMSTRFSIDDPKF----RRFNFLIEEGMRLFGEIHTVDYIPTMQCF 248          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 62/233 (26.61%), Postives = 104/233 (44.64%), Query Frame = 3
Query:   81 VLAVAYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTT-DLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGE---LSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWFDIQGIE 767
            +L +AYF W   KS+   AKLP     LP VG LPFL     +H  F +L   YGPI+ L LG    V++    L ++V+  +   F+ R   +   + +  G  +A+++ G  W   RK                 L  QE K+    +  +D    + ID+     +S++ ++C    I +  + E  +  +T     +K     ++   G  N+ D+FP L+ F  +G+E
Sbjct:    9 LLILAYFFWV--KSKTPGAKLPRSLPSLPLVGSLPFLPRRGHMHVNFFKLQEKYGPIYSLRLGTTTTVIIGHYQLAREVLIKKGKEFSGRPQMVTQSLLSDQGKGVAFADAGSSWHLHRKLVFSTFSLFKDGQKLEKLICQEAKSLCDMMLAHDK---ESIDLSTPIFMSVTNIICA---ICFNISYEKNDPKLT----AIKTFTEGIVDATGDRNLVDIFPWLTIFPNKGLE 229          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 56/228 (24.56%), Postives = 101/228 (44.30%), Query Frame = 3
Query:  147 PGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWF-----DIQG-IERKAKKISLWFENIIN 812
            P P G P +G L  +G    H+   +L   YGP+  L LG    VVVSS    +QV+R  D     R         ++   DIA+S Y   W ++RK  V ++ S   + +   ++ +EVK  I  +  + ++   P+++    +   V V+    +G    +  EG           + E + ++G+ + +D  P + W       +QG  ER  + ++ +FE + +
Sbjct:   32 PCPPGFPIIGNLHQIGELP-HQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQ-KNPVNLNNKCLELTVSVVCRTAFG----VSFEGTVLNSDRFNKIVREALEMLGSFSAADFIPYVGWIIDVLTGLQGRRERSKRDLNAFFEQMFD 253          
BLAST of CF831954 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 61/243 (25.10%), Postives = 112/243 (46.09%), Query Frame = 3
Query:   81 VLAVAYFA--WNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAEL----MVLMGTPNISDVFPVLSWF--DIQGIERKAKKI 785
            ++   +FA  +    +RK    LPPGP  LP +G L  LG+   H+   +L   YGP+  L LG    VV S+P  VK V++  D     R         ++   D+A++ Y   W  +RK  V ++ +   + +   +R++EV + + +   +   + + +++ +  +     VI  + +G  LE         G++L+    E+    M ++G+   SD FPV+      I G+  K +K+
Sbjct:    7 IVVFVFFASIFIAKNTRKTKKNLPPGPPRLPIIGNLHQLGSKP-HRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFV-EFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINLE---------GSKLENTYEEVIHGTMEVLGSFAASDYFPVIGGIIDRITGLHNKCEKV 238          
The following BLAST results are available for this feature:
BLAST of CF831954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
C71BH_ARATH2.675e-1223.05Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
CP1B1_RAT3.493e-1232.61Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1... [more]
TCMO_RUTGR4.562e-1232.09Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
CY250_MOUSE4.562e-1229.44Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE... [more]
CP2F5_GORGO4.562e-1226.78Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]
CP2A9_MESAU5.959e-1226.89Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP... [more]
CP18A_DROME5.959e-1226.51Cytochrome P450 18a1 OS=Drosophila melanogaster GN... [more]
CP17A_RAT5.959e-1226.61Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
C71BW_ARATH5.959e-1224.56Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH5.959e-1225.10Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01B08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831954 ID=CF831954; Name=CF831954; organism=Citrus sinensis; type=EST; length=832bp
CCCTAACTAAAATCGAAATGGCTTTGCGGGTCGATGATGCCAGCAGCAAT
GACACTGCAATTATCACTTGTTTAGTTTCTGTGCTTGCCGTGGCTTATTT
CGCATGGAATGTGAACAAATCAAGGAAAGCAAATGCTAAACTTCCACCAG
GACCTCGCGGCTTGCCTGCAGTCGGATACCTCCCATTTCTCGGAACTACT
GACTTGCACAAGAAATTCACGGAATTATGTGGAGTTTACGGTCCGATCTT
CAAGCTCTGGCTCGGAAATAAATTATGTGTCGTGGTGAGCTCACCTTCCC
TAGTTAAACAAGTGGTTCGTGATCAAGATACAACGTTCGCAGACCGTGAC
CCGCCGATCGCTGGGCTAGTGGCCACCTTTGGTGGCAATGATATTGCATG
GTCCAATTACGGTCCCGAATGGAGTAAGTTGCGCAAATTTTTTGTGGGCA
AGATGATGAGTAACGCAAGCCTTGATGCTTGTTATGCTCTAAGAAAACAA
GAGGTTAAAAATACTATCAGGGATTTGTATAACAACGACAACAAAATTGG
TAAGCCCATTGACATTGGTGAATTGTCAATTTCAACCTTGGTATGTGTTA
TTCAGAACATACTGTGGGGTGAAGCGCTTGAAATAAGAGAGGAAGGGATC
ACTAATCTTGGGGCTGAGCTAAAATTTAAGCTGGCAGAACTCATGGTCCT
AATGGGAACACCGAATATTTCGGACGTCTTTCCAGTGCTTTCATGGTTTG
ATATACAAGGTATAGAGAGGAAAGCAAAGAAGATTTCTCTCTGGTTTGAA
AATATTATAAATTCTACTGTTGAAAAGTATAG
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