CF831956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROMP (ATP synthase gamma chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=atpG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.679e-26 Identity = 58/110 (52.73%), Postives = 83/110 (75.45%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT K++VE+ ++ N + P ++FEQ P Q+LD+++PLY+ +QILRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNIEKNDSDKLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM5 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9515) GN=atpG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.679e-26 Identity = 58/110 (52.73%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT K++VE+ ++ N+ + P ++FEQ P Q+LD+++PLY+ +QILRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKNSKLLVEKSNLEKNESDRLPSDIVFEQSPDQLLDSLLPLYLQNQILRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROMS (ATP synthase gamma chain OS=Prochlorococcus marinus (strain AS9601) GN=atpG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM2 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9215) GN=atpG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PROM0 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9301) GN=atpG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 57/110 (51.82%), Postives = 84/110 (76.36%), Query Frame = -1 Query: 244 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGA 570 DE+FRLTT + K++VE+ ++ + E P ++FEQ P Q+LD+++PLY+ +Q+LRALQES ASE+A RM+AM+ A+DNA EL L++ YN+ RQA IT E+LE+V G+ Sbjct: 205 DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.195e-26 Identity = 60/112 (53.57%), Postives = 84/112 (75.00%), Query Frame = -1 Query: 238 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEA 570 DE+FRLTT EG++ VE S N P ++FEQ P Q+L+A++PLY+ +Q+LR+LQES ASE+A+RM+AM+ A+DNA EL K L++ YN+ RQA IT E+LE+V G+ A Sbjct: 203 DEIFRLTTKEGRLSVEAGSAPENSQPALPSDIVFEQSPDQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_PHATR (ATP synthase gamma chain, chloroplastic OS=Phaeodactylum tricornutum GN=ATPC PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.070e-25 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+F+LT+ G+ VER + + P M+FEQDP QI++A++PLY+N QILR LQES ASE+AARM +M +A+DNA L K L++ YN+ RQA +T ELLEI++GA AL Sbjct: 257 DEVFQLTSESGQFGVERTELDVAAPQEFPNDMIFEQDPIQIVNAILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGSLAKQLNLEYNRARQAAVTQELLEIISGASAL 369
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_ODOSI (ATP synthase gamma chain, chloroplastic OS=Odontella sinensis GN=ATPC PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.070e-25 Identity = 61/113 (53.98%), Postives = 84/113 (74.34%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFNKGELSPL-MLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+F+LT++ G VER + + + P M+FEQDP QI+++++PLY+N QILR LQES ASE+AARM +M +A+DNA +L K LS YN+ RQA +T E+LEIV+GA AL Sbjct: 257 DEVFQLTSSGGDFEVERTELEVAEPQDFPNDMIFEQDPIQIINSILPLYLNGQILRTLQESVASELAARMQSMQSASDNAGDLAKRLSTEYNRARQAAVTQEILEIVSGASAL 369
BLAST of CF831956 vs. ExPASy Swiss-Prot
Match: ATPG_SYNPW (ATP synthase gamma chain OS=Synechococcus sp. (strain WH7803) GN=atpG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 59/113 (52.21%), Postives = 85/113 (75.22%), Query Frame = -1 Query: 235 DELFRLTTNEGKMIVERDSVTFN-KGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEAL 570 DE+FRLTT +G + VE S N + ELS ++FEQ P Q+L+A++PLY+ +Q+LR+LQE+ ASE+A+RM+AM+ A+DNA L K L++ YN+ RQA IT E+LE+ GA A+ Sbjct: 203 DEIFRLTTKDGDLRVETGSAPANAQPELSSEIVFEQSPDQLLNALLPLYLQNQVLRSLQEAAASELASRMTAMNNASDNAKALAKTLTLDYNKARQAAITQEILEVAGGAAAV 315 The following BLAST results are available for this feature:
BLAST of CF831956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831956 ID=CF831956; Name=CF831956; organism=Citrus sinensis; type=EST; length=570bpback to top |