CF831959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.396e-46 Identity = 82/124 (66.13%), Postives = 101/124 (81.45%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 640 GG C+PP HFD+++P + +IA ++GI+P+ +RR+ C + GGIRFT+NGHSYFNLVL+TNVGGAGDVHSVS+KGS+T WQ MSRNWGQNWQSNSYL GQSL F +T SD R+V S NV P W Sbjct: 119 GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTW 242
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 1.553e-45 Identity = 79/126 (62.70%), Postives = 99/126 (78.57%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 ++GGWCNPP QHFDM++PA+ IA +AGIVP++++R+PC + GGIRF ++GH YF LV +TNVGG+G V +SIKGS TGW AMSRNWG NWQSN+YL GQSL F + DGR VT+ NV P NW Sbjct: 117 NSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.649e-45 Identity = 81/126 (64.29%), Postives = 99/126 (78.57%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP +HFDM++PA+ IA RAGIVP+++RR+PC + GGIRF VNGHSYF LVL+TNVGG+G V + IKGS TGW AMSRNWG NWQSN+ L GQ+L F++ A DGR VT+ +V P W Sbjct: 113 DAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGW 238
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.459e-45 Identity = 81/126 (64.29%), Postives = 97/126 (76.98%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 +NGGWCNPP +HFDMA+PA+ +I R GIVP+ F+R+ C KKGG+RF +NG YF LV I NVGGAG + SVSIKGSKTGW AMSRNWG NWQSN+YL GQ+L F +T +DG T NVVP +W Sbjct: 115 NNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSW 240
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.901e-45 Identity = 76/126 (60.32%), Postives = 100/126 (79.37%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 ++GGWCNPP QHFDMA+PA+ QI R GIVP++F+R+ C +KGG+RFT+NG+SYF LVLITNVGG G + SV IKG+KTGW MSRNWG NWQ+N+YL Q++ F +T++ G+T+ +V P NW Sbjct: 112 NDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNW 237
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.524e-44 Identity = 79/126 (62.70%), Postives = 96/126 (76.19%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP +HFDM++PA+ IA +AGIVP++F+R+PC K GGIRFT++G YF LV + NVGG+G V VSIKGSKT W AMSRNWGQNWQSN+YL QSL F++ D R VT N+ P NW Sbjct: 111 DAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNW 236
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.607e-42 Identity = 75/127 (59.06%), Postives = 99/127 (77.95%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP +HFD++ PAFLQIAQ +AGIVPIS+RR+PC K GGIR+T+ G+ YFNLV+++NVGGAGDV +S+KG+K W + RNWGQ WQ++ L G+SL F++ D R TS +V+P +W Sbjct: 130 DNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDW 256
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.675e-42 Identity = 77/127 (60.63%), Postives = 98/127 (77.17%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFDMA+PAFL IA+ +AGIVPI ++++ C + GG+RFT+NG +YF LVLI+NV G G++ V IKGSK+ W+ MSRNWG N+QSN+YL GQSL F++ SDG + NVVP NW Sbjct: 117 DNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKGSKSNKWETMSRNWGANYQSNTYLNGQSLSFKVQLSDGSIKAALNVVPSNW 243
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.106e-42 Identity = 75/128 (58.59%), Postives = 97/128 (75.78%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK--TGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D+GGWCNPP HFDMA+PA+ +I R GIVP++FRR+PC ++GG+RFTV G YF LVL+TNV AG V S+ ++GS+ GW AMSRNWG NWQS +YL GQ L F++TA+DG+T+ VVP +W Sbjct: 123 DDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSW 250
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 7.975e-42 Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFDMA+PA+ +I RAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ L F++T DG+T+ N+VP W Sbjct: 139 DNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265 The following BLAST results are available for this feature:
BLAST of CF831959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831959 ID=CF831959; Name=CF831959; organism=Citrus sinensis; type=EST; length=646bpback to top |