CF831959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 3.958e-41 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFDMA+PA+ +I AGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TNV G + S+ I GS T W M RNWG NW S SYL GQ+L F++T DG+T+ N+VP W Sbjct: 123 DNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGW 249
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 6.751e-41 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFDMA+PA+ +I RAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVL+TNV G + S+ + GS T W M RNWG NW S SYL GQ L F++T DG+T+ N+VP W Sbjct: 141 DNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.964e-40 Identity = 71/126 (56.35%), Postives = 100/126 (79.37%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D+GGWCNPP HFDM++PA+ I RAGIVP+ ++++ C ++GG+RFTV+G +YF LVLITNV G+G V ++S+KGSKTGW ++RNWG NWQ NS L+GQ+L F++T++ G+T+ N+VVP W Sbjct: 116 DDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 7.464e-40 Identity = 70/127 (55.12%), Postives = 94/127 (74.02%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D+GGWCNPP HFDMA+PA+ +I R GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S +YL GQ L F++T +DG+T+ NVV W Sbjct: 123 DSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 9.749e-40 Identity = 71/126 (56.35%), Postives = 93/126 (73.81%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP +HFDM++PA+ IA +GIVP+ + R PC + GGIRF + GH Y+ LVL+TNV G+G V + +KGS T W +MSRNWG+NWQSN+YL GQ+L F++ A DG VT+ +V P NW Sbjct: 115 DAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 9.749e-40 Identity = 70/127 (55.12%), Postives = 91/127 (71.65%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 DNGGWCNPP HFDMA+PA+ +I AGI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNV AG + S+ + GS T W M+RNWG W S +YL GQ L F++T +D +T+ NVVP W Sbjct: 128 DNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.172e-39 Identity = 69/126 (54.76%), Postives = 97/126 (76.98%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 ++GGWCNPP HFDMAEPA+LQI +AGI+P+ ++++ C ++GGIRFT+ G ++F LVL++NV G+G V SVS+KG TGW ++RNWG NWQ NS L+GQ+L F +T++ G+T+ NVVP W Sbjct: 116 NSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 4.838e-39 Identity = 69/126 (54.76%), Postives = 96/126 (76.19%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 ++GGWCNPP HFDMAEPA+LQI +AGIVP+ ++R+PC K+GG+RFT+ G +YF LVLI+NV G+G + SV +KG T +SRNWG NWQS++ L+GQ+L F +T++ G+T+ N+VP W Sbjct: 121 NDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.349e-38 Identity = 67/125 (53.60%), Postives = 97/125 (77.60%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTA-SDGRTVTSNNVVPGNW 640 GGWCNPP HFDMA+PAF+++A RAGI+P+++RR+PC + GG+RF G+SY+ L+ + NVGGAGD+ S+++KGS+T W +MS NWG ++Q+ S L GQSL F++T+ + G T+ + NV P NW Sbjct: 125 GGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANW 249
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.986e-38 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 640 G WCNPP +HFD++ P FL+IAQ +AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ + F++T SDG T NNV+P NW Sbjct: 141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264 The following BLAST results are available for this feature:
BLAST of CF831959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831959 ID=CF831959; Name=CF831959; organism=Citrus sinensis; type=EST; length=646bpback to top |