CF831959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.986e-38 Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = -1 Query: 269 GGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 640 G WCNPP +HFD++ P FL+IAQ +AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + L GQ + F++T SDG T NNV+P NW Sbjct: 134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.655e-37 Identity = 67/122 (54.92%), Postives = 90/122 (73.77%), Query Frame = -1 Query: 269 WCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 634 WCNPP +HFD++ FL+IA+ +AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +KG+KTGW M +NWGQNW + + L GQ L F++T SDG T NV+P NW Sbjct: 140 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNW 261
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.318e-36 Identity = 66/126 (52.38%), Postives = 90/126 (71.43%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP +HFDM++PA+ +I RAGIVP+ +RR+ C ++GG+RFTV G +F LVL+ NV G+G V +VS++G+ TGW MSRNWG NWQS + L GQ L F +T + G+ + +V P W Sbjct: 116 DGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGW 241
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.721e-36 Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = -1 Query: 269 WCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 634 WCNPP +HFD++ FL+IA+ +AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD+ V +K +KTGW M +NWGQNW +++ L GQ L F++T +DG T NV+P NW Sbjct: 146 WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNW 267
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.834e-36 Identity = 67/126 (53.17%), Postives = 92/126 (73.02%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCN P +HF+M+E AFL++A+++A IVP+ FRR+ C + GG+RFT+ G + F VLITNV G+V +V +KGS+TGW M RNWGQNWQ ++ L GQ L F++T GRTV + +V P +W Sbjct: 122 DYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.007e-36 Identity = 69/126 (54.76%), Postives = 90/126 (71.43%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GGWCNPP HFDM++PA+ QI +AGIVP+ ++R+ C ++GG+RFTV G +YF LVLITNV G+G V S IKG+ TGW MSRNWG NWQS + L GQ+L F +T + G+ + +V P W Sbjct: 117 DGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWW 242
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.007e-36 Identity = 70/126 (55.56%), Postives = 91/126 (72.22%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 D GG CNPP HF + +F +IA +AG++PI +RR+ C + GG+RF V G S+F VLI+NVGGAGDV SV IKG+++GW +M RNWGQ W NS GQ L F+LT+SDG+T+T+ NVVP W Sbjct: 119 DAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEW 244
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.903e-35 Identity = 66/127 (51.97%), Postives = 93/127 (73.23%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGR-TVTSNNVVPGNW 646 +NGGWCNPP HFD+ +PAF++IA +AGI+P+S+RR+ C K GGIRF G+ Y+ LV + NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSL F+LT+ R T+ + N P +W Sbjct: 118 NNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.230e-35 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = -1 Query: 269 DNGGWCNPPFQHFDMAEPAFLQIAQ-SRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 646 +N GWCN P HFDM+ PAF +IA+ GIVP+ +RR+ C ++GG+RFT+ G FN+V+I+NVGG G V SV+++GSK W M+RNWG NWQS+ L GQ L F++T +D +T T NVVP +W Sbjct: 111 NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSW 238
BLAST of CF831959 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 9.442e-35 Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = -1 Query: 269 NGGWCNPPFQHFDMAEPAFLQIAQSRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLIGQSLFFQLTASDGRTVTSNNVVPGNW 643 N WCNPP +HFD+++P FL+IA+ +AG+VP+ FRR+PCAK GG++F + G+ +F ++L NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ L F+LT SDG +V P +W Sbjct: 175 NDNWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299 The following BLAST results are available for this feature:
BLAST of CF831959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831959 ID=CF831959; Name=CF831959; organism=Citrus sinensis; type=EST; length=646bpback to top |