CF831960
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 80/138 (57.97%), Postives = 103/138 (74.64%), Query Frame = -2 Query: 200 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 607 S++ S DVLA++S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V + L DP+ D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y+F+ + K+ IG Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.183e-44 Identity = 89/180 (49.44%), Postives = 116/180 (64.44%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRD-----------PQQDAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 ++R F Y+ G V A ++ M+ S DV A+AS++VD+S +E G+ +TVKW GKPVFIRRRTE++I+ VDLG L D P D R + EWLV++GVCTHLGC+P+ + AGDFGGWFCPCHGSHYD SGRIR+GPAP NL +P FLD+ + +G Sbjct: 14 TRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGSHYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG 190
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.382e-44 Identity = 79/138 (57.25%), Postives = 103/138 (74.64%), Query Frame = -2 Query: 200 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 607 S + S DVLA++S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V + L DP++D RVK + WLV +G+CTHLGC+PL + G++ GWFCPCHGS YD SGR+RKGPAP NL VP Y F+ + K+ IG Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIFISDKKIRIG 177
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.382e-44 Identity = 88/156 (56.41%), Postives = 111/156 (71.15%), Query Frame = -2 Query: 200 MSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNP--------------------EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 604 M+AS DV AMAS+ VD+S++E G+ +TVKWRGKPVFIRRR E+DI+LA SV LG+LRD AE P EWLV++GVCTHLGC+P+ + +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P +F+DE + +G Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTS--AENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKLG 191
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.730e-43 Identity = 80/138 (57.97%), Postives = 102/138 (73.91%), Query Frame = -2 Query: 200 SMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 607 S++ S DVLA++S+EVDLSSI G TVTVKW+GKP+FI RT + I A +V + L DP++D RVK + WLV +G+CTHLGC+PL N G++ GWFCPCHGS YD SGR+RKGPA NL VP Y F+ + K+ IG Sbjct: 40 SLNPSTDVLALSSIEVDLSSIAIGQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTHLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIFISDTKIRIG 177
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.709e-41 Identity = 88/181 (48.62%), Postives = 112/181 (61.88%), Query Frame = -2 Query: 200 SKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQ------------DAERVKNP--EWLVVVGVCTHLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 697 ++R F Y+ G V + + M+ S DV A+AS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV LG L D D R + EWLV+ GVCTHLGC+P+ +GDFGGWFCPCHGSHYD +GRIRKGPAP NL +P F+DE + +G Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.268e-40 Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = -2 Query: 200 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVK--NPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 703 + ++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++I+ + D+G+L DPQ D+ RVK EWLVV CTHLGCIPL + GD+GGWFCPCHGS YD SGR+RKGPAP NL VP Y F+D K+ IG Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKGPAPTNLPVPPYEFVDNTKIRIG 175
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.087e-39 Identity = 82/170 (48.24%), Postives = 109/170 (64.12%), Query Frame = -2 Query: 200 PSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDPQQDAERVKN--PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 700 P++R F FV TG L F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V++ SL DPQ D RVK+ +WLVV+G+CTHLGCIP+ + G++ G+FCPCHGS YD SGRIR+GPAP NL VP Y F+ + K+ IG Sbjct: 10 PTRRDFL-FVATGAAAAVGGAAALW--PFISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYQFVSDTKIQIG 176
BLAST of CF831960 vs. ExPASy Swiss-Prot
Match: UCRI_CHRVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Chromatium vinosum GN=petA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.990e-23 Identity = 64/163 (39.26%), Postives = 93/163 (57.06%), Query Frame = -2 Query: 200 ILKFVLSMSASKDVLAM-ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEEDIKLANSVDLGSLRDP----QQDAERVKN------PEWLVVVGVCTHLGCIPL---------PNAGDFGGWFCPCHGSHYDISGRIRKG-PAPYNLEVPSYSFLDENKMLIG 625 ++ FV SM+ S A A +E D+S +EPG+ + VKWRG PV++ R+ E + +S D L DP Q + KN PE+LV +G+CTHLGC P +G GG+ CPCHGS +D++ R+ K PAP NL +P + +L++ +LIG Sbjct: 40 LVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSSND-PKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSPTYRPEFGPDDLGSGWKGGFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILIG 201 The following BLAST results are available for this feature:
BLAST of CF831960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831960 ID=CF831960; Name=CF831960; organism=Citrus sinensis; type=EST; length=797bpback to top |