CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 9.236e-43 Identity = 76/102 (74.51%), Postives = 90/102 (88.24%), Query Frame = -1 Query: 164 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 469 PV A +NCADN+GA+ LYII+VKG RL RLP+A +GDMVMATVKKGKP+LRKKVMP+++VRQ K W R+DGVF+YFEDNAGVI NPKGEM+GSAITGP+G Sbjct: 18 PVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVG 119 HSP 2 Score: 31.187 bits (69), Expect = 9.236e-43 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KEC DLWPR+AS + +V Sbjct: 120 KECADLWPRVASNSGVVV 137
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.567e-42 Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK LYIISVKGI G+L RLP+A VGDMVMATVKKGKP+LRKKV P+V++RQ K + RKDGVF+YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 31.9574 bits (71), Expect = 1.567e-42 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWPRIAS A +I Sbjct: 123 KECADLWPRIASNAGSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.518e-42 Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK LY+I+V GI GRL RLP+A VGDM +ATVKKGKP+LRKKVMP+V++RQ KP+ R+DGVF+YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 31.9574 bits (71), Expect = 4.518e-42 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWPRIAS A +I Sbjct: 123 KECADLWPRIASNAGSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 4.518e-42 Identity = 75/101 (74.26%), Postives = 88/101 (87.13%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADN+GAK LYI+SV G RL RLP+A GDMV+ATVKKGKPDLRKK+MP+++VRQ K W RKDGV++YFEDNAGVIVNPKGEM+GSAITGP+ Sbjct: 20 PVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPV 120 HSP 2 Score: 32.7278 bits (73), Expect = 4.518e-42 Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KEC DLWPRIAS A +V Sbjct: 122 KECADLWPRIASNAGTVV 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_CANFA (60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 5.888e-42 Identity = 80/101 (79.21%), Postives = 89/101 (88.12%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK LYIISVKGI GRL RLP+A VGDMVMATVKKGKP LRKKV P+V++RQ K + RKDGVF+YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 29.6462 bits (65), Expect = 5.888e-42 Identity = 12/17 (70.59%), Postives = 13/17 (76.47%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWP IAS A +I Sbjct: 123 KECADLWPXIASNAGSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 7.672e-42 Identity = 76/101 (75.25%), Postives = 90/101 (89.11%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK LY+I+V GI GRL RLP+A VGDM +ATVKKGKP+LRKKVMP+V++RQ KP+ R+DGVF+YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 32.3426 bits (72), Expect = 7.672e-42 Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWPRIAS A++I Sbjct: 123 KECADLWPRIASNASSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_CAEEL (60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.654e-38 Identity = 72/101 (71.29%), Postives = 85/101 (84.16%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK L++ISV GI GRL RLPSA VGDM + +VKKGKP+LRKKV+ V++RQ K + RKDG F+YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 30.8018 bits (68), Expect = 3.654e-38 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWPRIA+ A +I Sbjct: 123 KECADLWPRIAANAGSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_BRUMA (60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.951e-37 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +NCADNTGAK L++I+V GI GRL RLPSA VGDM +A+VKKGKP+LRKKV+ +V+VRQ K + R DG +YFEDNAGVIVN KGEM+GSAITGP+ Sbjct: 21 PVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDMFVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGPV 121 HSP 2 Score: 31.9574 bits (71), Expect = 3.951e-37 Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = -2 Query: 112 KECGDLWPRIASAANAI 162 KEC DLWPRIAS A +I Sbjct: 123 KECADLWPRIASNAGSI 139
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_DICDI (60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.139e-36 Identity = 71/101 (70.30%), Postives = 85/101 (84.16%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A +N ADN+GAK LY+I+VKGI GRL RLPSA VGDMVMATVKKGKP+LRKKV ++VRQ K W RKDGV++YFEDNAGV+ NPKGE++G+ I GP+ Sbjct: 18 PVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPV 117 HSP 2 Score: 30.4166 bits (67), Expect = 1.139e-36 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KEC DLWP++A+ A IV Sbjct: 119 KECSDLWPKVATNAGTIV 136
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.130e-32 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKG-EMQGSAITGPI 469 PV A VNCADNTGAK LYIISVKG GRL RLP+A +GD+VMA+VKKGKP+LR+KV+ +VI+RQ K W RKDG +YFEDNAGVIVN +G + + S I GP+ Sbjct: 20 PVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPV 121 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |