CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_THEFY (50S ribosomal protein L14 OS=Thermobifida fusca (strain YX) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK L I V G +GR A +GD ++ATVK P K ++ +V+VR K R DG ++ F++NA V++ G+ +G+ I GP+G Sbjct: 11 ADNTGAKELLTIRVLGGSGRRY----ASIGDTIVATVKDALPGAGVKKGDIVKAVVVRTTKERRRPDGFYIRFDENAAVLIKDGGDPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PELPD (50S ribosomal protein L14 OS=Pelobacter propionicus (strain DSM 2379) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 ++ ADN+GAK L+ I V G + R A VGD+++A+V++ P+ + K V+ +VIVR K R DG ++ F+DN+GV++N + E G+ I GP+ Sbjct: 8 LDVADNSGAKKLFCIKVLGGSKRKY----AGVGDIIVASVREALPNSKVKKGDVVKAVIVRTAKELGRPDGSYIRFDDNSGVVINNQKEPVGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_BEUC1 (50S ribosomal protein L14 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rplN PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK + I V G +GR A +GD+++ATVK P R V+ +V+VR K R DG ++ F++NA V++ GE +G+ I GP+G Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKRGDVVKAVVVRTAKERRRPDGSYIRFDENAAVLLKSDGEPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_CUCSA (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus GN=rpl14 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I + G + R A +GD+++A +KK P+ R +V+ +VIVR CK R++G+ + ++DNA V+++ +G +G+ I G I Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKRENGMIIRYDDNAAVVIDQEGNPKGTRIFGAI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_AMBTC (50S ribosomal protein L14, chloroplastic OS=Amborella trichopoda GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.618e-11 Identity = 34/99 (34.34%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I + G + A +GD+++A +K+ P++ R +V+ +VIVR CK R +G+ + ++DNA V+++P+G +G+ + G I Sbjct: 8 LNVADNSGARELMCIRIVGASNPRY----AHIGDVIVAVIKEAVPNMPLERSEVIRAVIVRTCKELKRDNGIIIRYDDNAAVVIDPEGNPKGTRVFGSI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_STRGG (50S ribosomal protein L14 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK + I V G +GR A +GD+++ATVK P K V+ +VIVR K R+DG ++ F++NA VI+ G+ +G+ I GP+G Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVIVRTVKERRRQDGSYIRFDENAAVILKNDGDPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SALTO (50S ribosomal protein L14 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGA+ + I V G +GR A +GD+++ATVK P K V+ +V+VR K R DG ++ F++NA VI+ G+ +G+ I GP+G Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SALAI (50S ribosomal protein L14 OS=Salinispora arenicola (strain CNS-205) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGA+ + I V G +GR A +GD+++ATVK P K V+ +V+VR K R DG ++ F++NA VI+ G+ +G+ I GP+G Sbjct: 11 ADNTGAREILCIRVLGGSGRRY----ASIGDVIVATVKDAIPGAGVKKGDVVKAVVVRTAKEKRRPDGSYIRFDENAAVIIKDGGDPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_NOCSJ (50S ribosomal protein L14 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK + I V G +GR A +GD+++ATVK P K V+ +V+VR K R DG ++ F++NA VI+ GE +G+ I GP+G Sbjct: 11 ADNTGAKEILCIRVLGGSGRRY----AGIGDVIVATVKDAIPGGNVKKGDVVKAVVVRTVKERRRPDGSYIRFDENAAVILKNDGEPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CHLTE (50S ribosomal protein L14 OS=Chlorobium tepidum GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD +M +VK P +K V +V+VR K RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AALGDQIMVSVKAAVPGGVVKKKDVCKAVVVRCVKEQKRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPV 102 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |