CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_ZYGCR (50S ribosomal protein L14, chloroplastic OS=Zygnema circumcarinatum GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 37/99 (37.37%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G + R A +GDMV+A VK+ P++ + +++ +VIVR K R +G+ + F+DNA V++N +G +G+ + GP+ Sbjct: 8 LNVADNSGARKLMCIRVLGSSNRKY----AHIGDMVIAVVKETVPNMPLKKSEIVRAVIVRTRKGLKRDNGMVLRFDDNAAVVINQEGNPRGTRVFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_MESVI (50S ribosomal protein L14, chloroplastic OS=Mesostigma viride GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GAK + I V G + R A +GD+++ VK P++ + +V+ +V+VR CK R++G+ + F+DNA V++N G +G+ + GP+ Sbjct: 8 LNVADNSGAKKIMCIRVLGGSQRKY----AAIGDVIIGVVKDSVPNMSLKKSEVVRAVVVRTCKGIRRENGMTIRFDDNAAVVINKDGNPKGTRVFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SULDN (50S ribosomal protein L14 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADNTGAK + I V G + R A VGD+++A+VKK P + K V+ +VIVR K R++G + F+DNA VI++ K E G+ I GPI Sbjct: 8 LNVADNTGAKEVMCIKVLGGSKRRY----AQVGDVIIASVKKATPTAKVKKGKVVKAVIVRTAKEIHRENGSLIRFDDNAAVILDDKREPIGTRIFGPI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PROVI (50S ribosomal protein L14 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD V+ +VK P +K+V +V+VR K RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQVIVSVKAAVPGGVVKKKEVCKAVVVRCAKELRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CHLCH (50S ribosomal protein L14 OS=Chlorobium chlorochromatii (strain CaD3) GN=rplN PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD V+ +VK P +K V +V+VR K RKDG ++ F++NA VI+N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQVIVSVKTAVPGGIVKKKDVCKAVVVRAVKESRRKDGSYIRFDENAVVILNAQGEPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_NICTO (50S ribosomal protein L14, chloroplastic OS=Nicotiana tomentosiformis GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 35/99 (35.35%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I + G + R A +GD+++A +K+ P++ R +V+ +VIVR CK R +G+ + ++DNA V+++ +G +G+ I G I Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAIPNMPLERSEVVRAVIVRTCKELKRDNGIIIRYDDNAAVVIDQEGNPKGTRIFGAI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_IPOPU (50S ribosomal protein L14, chloroplastic OS=Ipomoea purpurea GN=rpl14 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11 Identity = 36/106 (33.96%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 146 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG*RVWRF 454 +N ADN+GA+ L I + G + R A +GD+++A +K+ P++ R +V+ +VIVR CK R +G+ + ++DNA V+++ +G +G+ I G I + +F Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDKEGNPKGTRIFGAIARELRQF 109 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |