CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.036e-23 Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P+ A + C DNTGAK + +I VK + R+P+A VGDM +A+VKKG P++R KV+ +V+VRQ +P+ R DG + FEDNA V+V P GE++GS I GP+ Sbjct: 13 PLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPV 113 HSP 2 Score: 23.0978 bits (48), Expect = 1.036e-23 Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 +E + WPRIA+ ++ IV Sbjct: 115 REAAERWPRIAAISSTIV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METST (50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl14p PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.036e-23 Identity = 53/101 (52.48%), Postives = 70/101 (69.31%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P+ A + C DNTGA+ + IISVKG G RL SA VGDMV+ +VKKG D+R++V +V+VRQ K + R DG+ + FEDNA VI+ G ++GS I GPI Sbjct: 13 PIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRREVTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPI 113 HSP 2 Score: 28.1054 bits (61), Expect = 1.036e-23 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 KE DLWP I SAA+ IV Sbjct: 115 KEAADLWPAIGSAASIIV 132
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.807e-23 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.807e-23 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.361e-23 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 P A + CADNTGAK L II+VKG G RLP+ VG +V +VKKG P++RK+V+P++I+RQ K + R DG + FEDNA VIV P+G +GS I GP+ Sbjct: 13 PNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HYPBU (50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.361e-23 Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V + V ADN+GAK II V G GRL R+P A VGDMV+ TVKKG P++RK+V+ ++++RQ +P+ R DG ++ FEDNA VIV+P G +GS I GP+ Sbjct: 20 VGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGTPEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPV 119
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_STAMF (50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.259e-23 Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V + V ADN+GAK + II V G GRL R+P A +GD+V+ TVKKG P++RK+V+ +VIVRQ +P+ R DG ++ FEDNA IV P+G +GS I GPI Sbjct: 22 VGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDLVVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGPI 121
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METJA (50S ribosomal protein L14P OS=Methanocaldococcus jannaschii GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.868e-23 Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A CADNTGAK + II+V+ G RLP+A VGDMV+ TVKKG P++RK+V+P+V++RQ K R DG + F DNA VIV P G +GS I GP+ Sbjct: 13 PVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLPAVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_AERPE (50S ribosomal protein L14P OS=Aeropyrum pernix GN=rpl14p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.435e-22 Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V + V ADN+GAK + IISV + RL RLPSA VGD+V+ +VKKG P +R++V+ +V+VRQ +P+ R DG ++ FEDNA VIVNP G +GS + GPI Sbjct: 22 VGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDLVVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGPI 121 HSP 2 Score: 22.7126 bits (47), Expect = 1.435e-22 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 +E + WPR+A A IV Sbjct: 123 REAAERWPRVAKIATMIV 140
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_KORCO (50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.530e-22 Identity = 54/101 (53.47%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A + CADNTGAK L II V G GR R+P+A VGDMV VK+GK DL K +++VRQ P+ RK+G ++ FEDNA V+VN G +GS GPI Sbjct: 22 PVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKYDLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPI 122 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |