CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.132e-20 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 167 PVAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 469 PV A + CADN+GAK L +I+V R RLPSA VGD VKKG +LRK+V +VI+RQ P R +GV + FEDNA V++ P+GE +G+ I GP+ Sbjct: 21 PVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPV 121 HSP 2 Score: 22.3274 bits (46), Expect = 2.132e-20 Identity = 7/17 (41.18%), Postives = 12/17 (70.59%), Query Frame = -2 Query: 109 ECGDLWPRIASAANAIV 159 E + WPR+A+ A+ +V Sbjct: 124 EASEKWPRVANLASMVV 140
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.443e-20 Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = -1 Query: 167 ATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 460 A + C DNTGA+T+ IISVK G R+P +GDM + +VKKG P++RK+++ +VIVRQ K + R DG+ + FEDNA VIV+ KG +G+ I GP+ Sbjct: 16 AKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPV 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.167e-20 Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = -1 Query: 167 TVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 457 TV ADN+GAK II + G G L R+P A + D+VM +V+KG P++RK+ +VIVRQ P+ R DG ++ FEDNA VIVNP G +G+ I GPI Sbjct: 26 TVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPI 122
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.701e-20 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = -1 Query: 167 ATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 460 ++V ADN+GAK II + G G L R+P A + D+VM +V+KG PD+RK+ +VIVRQ P+ R DG ++ FEDNA VI+NP G +G+ + GPI Sbjct: 22 SSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPI 119 HSP 2 Score: 23.0978 bits (48), Expect = 4.701e-20 Identity = 7/18 (38.89%), Postives = 12/18 (66.67%), Query Frame = -2 Query: 109 KECGDLWPRIASAANAIV 162 +E + WP+IAS A ++ Sbjct: 121 REAAERWPKIASVATMVI 138
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.283e-20 Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ L I SV G GR R P A +GD + +V KG P++R++V+ +V+VRQ KP R DG + FEDNA VI++ GE +G+ I GPI Sbjct: 18 ITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.283e-20 Identity = 48/96 (50.00%), Postives = 65/96 (67.71%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 + CADNTGA+ L I SV G GR R P A +GD + +V KG P++R++V+ +V+VRQ KP R DG + FEDNA VI++ GE +G+ I GPI Sbjct: 18 ITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPI 113
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.212e-19 Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLI--RLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V ADN+GAK + +I V G + + R+P A VGDMV+ V++GKP+LRK++ +++VRQ +P+ R DG ++ FEDNA VIV P+G+ +GS I GP+ Sbjct: 28 VPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPV 125
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19 Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLI--RLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V ADN+GAK + +I V G + + R+P A VGDMV+ V++GKP+LRK++ +++VRQ +P+ R DG ++ FEDNA VIV P+G+ +GS I GP+ Sbjct: 28 VPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPV 125
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PYRAR (50S ribosomal protein L14P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl14p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19 Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLI--RLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V ADN+GAK + +I V G + + R+P A VGDMV+ VK+GKP+LR+++ ++VRQ +P+ R DG ++ FEDNA VIV P+G+ +GS I GP+ Sbjct: 28 VPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVKEGKPELRRQIFRGIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPV 125
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.701e-19 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLI--RLPSACVGDMVMATVKKGKPDLRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 V ADN+GA+ + +I V G + + R+P A VGDMV+ V++GKP+LRK++ +++VRQ +P+ R DG ++ FEDNA VIV P+G+ +GS I GP+ Sbjct: 28 VPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPV 125 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |