CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_ACAM1 (50S ribosomal protein L14 OS=Acaryochloris marina (strain MBIC 11017) GN=rplN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.099e-12 Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = -1 Query: 167 TVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 457 T+N ADN+GAK L I V G R VGD+++ATVK P++ K V+ +VIVR K CR+ G+ + F+DNA V++NP G +G+ + GP+ Sbjct: 7 TLNVADNSGAKRLLCIRVIGGGNRRY----GGVGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKSICRESGMSIRFDDNAAVLINPDGNPRGTRVFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SACEN (50S ribosomal protein L14 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.435e-12 Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADN+GAK + I V G +GR A +GD+++ATVK P K V+ +VIVRQ K R DG ++ F++NA V++ P GE +G+ I GP+G Sbjct: 11 ADNSGAKEILTIRVLGGSGRRY----AGIGDIIVATVKDAIPGANVKKGEVVKAVIVRQKKEKRRADGSYIRFDENAAVLIKPSGEPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_THERP (50S ribosomal protein L14 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplN PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.875e-12 Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADNTGAK + I V G G R + VGD+++A+VKK +P+ K V+ +VIVR K + RKDG ++ F+DNA V+V P+G+ +G+ I GP+ Sbjct: 11 ADNTGAKEIMCIRVLG--GSKHRYGT--VGDLIVASVKKAEPNAAVKKGDVVYAVIVRTKKEYRRKDGSYIKFDDNAAVLVTPQGQPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_MARPO (50S ribosomal protein L14, chloroplastic OS=Marchantia polymorpha GN=rpl14 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.448e-12 Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G + R A +GD+++A VK+ P++ + +++ +VIVR CK + R +G + F+DNA V++N +G +G+ + GPI Sbjct: 8 LNVADNSGARKLMCIRVIGTSNRKY----ANIGDIIIAVVKEAVPNMPIKKSEIVRAVIVRTCKEFKRNNGSIIKFDDNAAVVINQEGNPKGTRVFGPI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_HERA2 (50S ribosomal protein L14 OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=rplN PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.455e-12 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADNTGAK L I V G T R A VGD ++ATVK+ P K V+ +VIVR K + R DG + F+DNA VI+N +G +G+ I GP+ Sbjct: 11 ADNTGAKELLCIRVLGGTKRRY----ASVGDTIIATVKQANPGGSAKKGEVVRAVIVRVKKGYTRPDGSMIQFDDNAAVIINQQGNPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CLAMS (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=rplN PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12 Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKP--DLRK-KVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK + I V G +GR A +GD+++ATVK P +++K +V+ +VIVR K R DG ++ F++NA VI+N GE +G+ I GP+G Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CLAM3 (50S ribosomal protein L14 OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12 Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = -1 Query: 164 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKP--DLRK-KVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPIG 445 ADNTGAK + I V G +GR A +GD+++ATVK P +++K +V+ +VIVR K R DG ++ F++NA VI+N GE +G+ I GP+G Sbjct: 11 ADNTGAKEILTIRVLGGSGRRY----AGLGDVIVATVKDAIPGGNVKKGEVVKAVIVRTKKETRRPDGSYIKFDENAAVILNSNGEPRGTRIFGPVG 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CHLT3 (50S ribosomal protein L14 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12 Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GDM++ +VK P +K V +V+VR K + RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKRVRCIHVLGGTGRRY----ATIGDMIVVSVKSAIPGGAVKKKDVSKAVVVRTKKEYRRKDGSYIRFDENAVVLLNTQGEPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CHLP8 (50S ribosomal protein L14 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rplN PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.304e-12 Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD +M TVK P+ +K V +V+VR K RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AALGDQIMVTVKAAVPNGVVKKKDVCKAVVVRCAKEQRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_PROA2 (50S ribosomal protein L14 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD +M TVK P +K V +V+VR K RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----AAIGDQIMVTVKAAVPGGVVKKKDVCKAVVVRCAKEKKRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPV 102 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |