CF831988

Overview
NameCF831988
Unique NameCF831988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.901e-75
Identity = 138/233 (59.23%), Postives = 183/233 (78.54%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN + +VG+DQF+ K  TLT  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+ ++ ESGEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A+P++E ++ AI+ G+I PRDD KAR++I+++EFGWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTFE--GAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLVSMSESGEHIVAGTGELHLEICLQDLENDH-AGIPLKISPPVVAYRETVEGESSQTALSKSPNKHNRIYLKAQPIDEEVSLAIEGGKINPRDDFKARARIMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 7.077e-74
Identity = 145/233 (62.23%), Postives = 174/233 (74.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGR-IGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            + MG+K E +ED PCGN V +VG+DQF+ K+ T+T  +   AH IR MKFSVSPVVRVAV+ K  SDLPKLVEGLKRLAKSDP V+C  EESGEHIVAGAGELHLEICLKDL +D   G EI  +DPVVSFRE+V E+S    +SKSPNKHNRL+M+A P+   L + I+ G  I  +DDPKAR+  L++   WDK+ A  IW FGPE  G N+ V++ KGVQYLNEIKDS V
Sbjct:  434 LMMGRKTEQIEDCPCGNIVGLVGVDQFLVKSGTITTSEV--AHNIRVMKFSVSPVVRVAVEPKNPSDLPKLVEGLKRLAKSDPCVLCYSEESGEHIVAGAGELHLEICLKDLAEDH-AGIEIKTTDPVVSFRESVSEESSIMCLSKSPNKHNRLFMKASPISMELQDLIEAGSDISSKDDPKARANYLADNHEWDKNDAMNIWSFGPEGNGANLLVNVTKGVQYLNEIKDSFV 663          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.577e-73
Identity = 135/233 (57.94%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN V +VG+DQF+ K  TLT  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  + ESGEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +  +SKSPNKHNR+Y++A+P++E ++ AI+ G+I PRDD KAR++++++E+GWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVV+
Sbjct:  436 LMMGRFVEPIDDCPAGNIVGLVGIDQFLLKTGTLTTFES--AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMSESGEHIVAGTGELHLEICLQDLENDH-AGIPLKISPPVVAYRETVEGESSQVALSKSPNKHNRIYLKAQPIDEEVSLAIEGGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVS 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.059e-73
Identity = 136/233 (58.37%), Postives = 180/233 (77.25%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN V +VG+DQF+ K  TLT  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  + ESGEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +  +SKSPNKHNR+Y++A P++E ++ AI+ G+I PRDD KAR+++++++FGWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRFVEPIDDCPAGNIVGLVGVDQFLLKTGTLTTFE--GAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMSESGEHIVAGTGELHLEICLQDLENDH-AGIPLKISPPVVAYRETVEGESSQVALSKSPNKHNRIYLKAEPIDEEVSLAIEAGKINPRDDFKARARVMADDFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.689e-73
Identity = 134/233 (57.51%), Postives = 180/233 (77.25%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN + +VG+DQF+ K  TLT  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  + ESGEHIVAG GELHLEICL+DL+ D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A P++E ++ AI++G I PRDD KAR++I+++++GWD   A+KIWCFGP+  GPN+ +D  K VQYL+EIKDSVVA
Sbjct:  436 LMMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSET--AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMSESGEHIVAGTGELHLEICLQDLEHDH-AGVPLKISPPVVAYRETVESESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.512e-73
Identity = 136/233 (58.37%), Postives = 177/233 (75.97%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN V +VG+DQF+ K+ T+T  +   AH ++ MKFSVSPVV VAV+ K A+DLPKLVEGLKRL+KSDP V   + ESGEHIVAG GELHLEICL DLQ+D   G  +  SDPVV++RET+  +S    +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD KAR++IL+++ GWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRNTEAIDDCPAGNIVGLVGVDQFLLKSGTITTNEA--AHNMKVMKFSVSPVVEVAVEVKNANDLPKLVEGLKRLSKSDPCVKTYMSESGEHIVAGTGELHLEICLSDLQNDH-AGIPLRISDPVVAYRETIQAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIENGIINPRDDFKARARILADKHGWDVAEARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.991e-73
Identity = 133/233 (57.08%), Postives = 179/233 (76.82%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG + E ++D P GN V +VG+DQF+ K  TLT  +   A+ ++ MKFSVSPVV+VAV  K A+DLPKLVEGLKRL+KSDP V+  + ESGEHIVAG GELHLEICL+DL+++   G  +  S PVV++RETV  +S +  +SKSPNKHNR+Y++A P++E ++ AI+ G+I PRDD KAR++++++E+GWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVV+
Sbjct:  436 LMMGSRVEPIDDCPAGNIVGLVGIDQFLLKTGTLTTSET--AYNMKVMKFSVSPVVQVAVDVKNANDLPKLVEGLKRLSKSDPCVLTQMSESGEHIVAGTGELHLEICLQDLENEH-AGIPLKISPPVVAYRETVEAESSQVALSKSPNKHNRIYLKAEPMDEEVSLAIEQGKINPRDDFKARARVMADEYGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVS 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.743e-72
Identity = 135/233 (57.94%), Postives = 179/233 (76.82%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN + +VG+DQF+ K+ T+T  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  + ESGEHIVAG GELHLEICL+DL++D   G  +  S PVVS+RETV  +S    +SKSPNKHNR+Y++A+P++E ++  I++G I PRDD KAR++IL+++ GWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRSVEQIDDCPAGNIIGLVGIDQFLLKSGTITTNEA--AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMSESGEHIVAGTGELHLEICLQDLENDH-AGVPLRISPPVVSYRETVEGESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIENGVINPRDDFKARARILADKHGWDVVDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.476e-71
Identity = 134/233 (57.51%), Postives = 176/233 (75.54%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN V +VG+DQF+ K+ T+T  +   +H ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+ ++ ESGEHIVA  GELHLEICL DLQ+D   G  +  S P+VS+RETV  +S    +SKSPNKHNR+Y++A+P++E ++  I+ G I PRDD KAR++IL++  GWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRFVEAIDDCPAGNIVGLVGVDQFLLKSGTITTNEA--SHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTSMSESGEHIVAATGELHLEICLSDLQNDH-AGIPLKISPPIVSYRETVNAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFKARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.249e-70
Identity = 137/234 (58.55%), Postives = 172/234 (73.50%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC-TIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            I MG+  E V D+PCGNT  +VG+DQ+I K ATLT+ +   A  I+ MKFSVSPVVRVAV+ K   DLP+LVEGLKRL+KSDPMVV  T  E+GEHI+AGAGELHLEICLKDLQDDFM G  I  S PVV FRE+V + +    ++KSPNKHNRLY+   P+ +GLA+ I+D ++ P  + K R++ +S  +G D +L +KIW FGP   GPN+F +   GVQYLNEIK+SVVA
Sbjct:  458 IMMGRYVEQVADIPCGNTCGLVGVDQYILKQATLTDCES--AMTIKMMKFSVSPVVRVAVEPKNPGDLPRLVEGLKRLSKSDPMVVVITNTEAGEHIIAGAGELHLEICLKDLQDDFMKGTPIKISPPVVEFRESVNQATTEPGLAKSPNKHNRLYVNVEPMPDGLAQEIEDQKVTPEQEFKERARYMSTTYGMDVELMRKIWAFGPNGNGPNIFCEATHGVQYLNEIKESVVA 689          
The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
EF2_KLULA4.901e-7559.23Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_DICDI7.077e-7462.23Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_ASHGO1.577e-7357.94Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_SACKL2.059e-7358.37Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_YEAST2.689e-7357.51Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_PICGU3.512e-7358.37Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_CANGA5.991e-7357.08Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_CANAL1.743e-7257.94Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_DEBHA1.476e-7157.51Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_BLAHO1.249e-7058.55Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bp
CCGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGTTCGTTG
ATATGTGTAAGGGAGTTCAATACTTGAATGAAATTAAGGATTCTGTTGTT
GCTG
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