CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRLI (50S ribosomal protein L19 OS=Streptomyces lividans GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 ++V+ + ++P +PG V + V VI N+ RV KG+VI R+ AG+ TF +R++ VGVE FP+++P + +I+++ + VRRAKLYYLR+ Sbjct: 6 DSVDAASLRSDVPAFRPGDTVNVHVRVIEGNRSRVQQFKGVVIRRQGAGVRETFTVRKVSFSVGVERTFPVHTPIVEKIELVTRGDVRRAKLYYLRE 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRGC (50S ribosomal protein L19 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VIAR+ AGIS + +R++ GVGVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPAFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKGAGISENYTVRKISNGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRCO (50S ribosomal protein L19 OS=Streptomyces coelicolor GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 39/97 (40.21%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 ++V+ + ++P +PG V + V VI N+ RV KG+VI R+ AG+ TF +R++ VGVE FP+++P + +I+++ + VRRAKLYYLR+ Sbjct: 6 DSVDAASLRSDVPAFRPGDTVNVHVRVIEGNRSRVQQFKGVVIRRQGAGVRETFTVRKVSFSVGVERTFPVHTPIVEKIELVTRGDVRRAKLYYLRE 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SILST (50S ribosomal protein L19 OS=Silicibacter sp. (strain TM1040) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 391 ILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRN-AGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 I EA + +EIPD K G +++ + E R RV +G+ I+R+N +GI+ +F +R++ G GVE +FPLYS NI I+V+ + +VRRAKLYYLR + Sbjct: 4 IAQLEAEQIAALGKEIPDFKAGDTIRVGYKVTEGTRTRVQAYEGVCISRKNGSGIAGSFTVRKISFGEGVERVFPLYSTNIESIEVVRRGRVRRAKLYYLRSR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_MYCLE (50S ribosomal protein L19 OS=Mycobacterium leprae GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 V+ + +IP PG + + V + E K R+ KG+VI R+ GI TF +R+ GVGVE FP++SPNI I+++ + VRRAKLYYLR+ Sbjct: 7 VDQASLRDDIPAFSPGDTINVHVKVIEGVKERIQVFKGVVIRRQGGGIRETFTVRKESYGVGVERTFPVHSPNIDHIEMVIRGDVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_MYCLB (50S ribosomal protein L19 OS=Mycobacterium leprae (strain Br4923) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 V+ + +IP PG + + V + E K R+ KG+VI R+ GI TF +R+ GVGVE FP++SPNI I+++ + VRRAKLYYLR+ Sbjct: 7 VDQASLRDDIPAFSPGDTINVHVKVIEGVKERIQVFKGVVIRRQGGGIRETFTVRKESYGVGVERTFPVHSPNIDHIEMVIRGDVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LACRJ (50S ribosomal protein L19 OS=Lactobacillus reuteri (strain JCM 1112) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +IP+ + G V++ I E R R+ +G+VI R AGIS T+ +R++ GVGVE FP++SP + +I VL +VRRAKLYYLR++ Sbjct: 18 DIPEFRAGDTVRVHARIVEGSRERIQMFEGVVIKRHGAGISATYTVRKISNGVGVERTFPVHSPRVDKIDVLRYGRVRRAKLYYLRER 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LACRD (50S ribosomal protein L19 OS=Lactobacillus reuteri (strain DSM 20016) GN=rplS PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +IP+ + G V++ I E R R+ +G+VI R AGIS T+ +R++ GVGVE FP++SP + +I VL +VRRAKLYYLR++ Sbjct: 18 DIPEFRAGDTVRVHARIVEGSRERIQMFEGVVIKRHGAGISATYTVRKISNGVGVERTFPVHSPRVDKIDVLRYGRVRRAKLYYLRER 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_HAES2 (50S ribosomal protein L19 OS=Haemophilus somnus (strain 2336) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++ +P +PG +++KV V+ +KRR+ +G+VIA R+ G+ + F LR++ GVGVE +F +SP I I V K VR+AKLYYLR++ Sbjct: 8 IEQEQLKQNVPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAIRHRGLHSAFTLRKISNGVGVERVFQTHSPIIDSITVKRKGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_HAES1 (50S ribosomal protein L19 OS=Haemophilus somnus (strain 129Pt) GN=rplS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.281e-14 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++ +P +PG +++KV V+ +KRR+ +G+VIA R+ G+ + F LR++ GVGVE +F +SP I I V K VR+AKLYYLR++ Sbjct: 8 IEQEQLKQNVPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAIRHRGLHSAFTLRKISNGVGVERVFQTHSPIIDSITVKRKGAVRKAKLYYLRER 103 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |