CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_THELT (50S ribosomal protein L19 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 714 +++PD +PG V++ V I E K R+ +GIVI R +G+ TF +R++ +G +GVE FP +SP + +I+++ K RRAKLYY+RD +R K Sbjct: 16 KQLPDFRPGDTVKVHVKIVEGGKERIQIFEGIVIKIRGSGLGKTFTVRKIASGGIGVERTFPYHSPVVQKIEIVKKAVTRRAKLYYIRDIRGKIRLK 112
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRSY (50S ribosomal protein L19 OS=Streptococcus suis (strain 05ZYH33) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E N+ R+ +G+VI+R+ GIS + +R++ GVGVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGNRERIQIFEGVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRS2 (50S ribosomal protein L19 OS=Streptococcus suis (strain 98HAH33) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E N+ R+ +G+VI+R+ GIS + +R++ GVGVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGNRERIQIFEGVVISRKGQGISEMYTVRKISGGVGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRMU (50S ribosomal protein L19 OS=Streptococcus mutans GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 38/86 (44.19%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP+ +PG V++ + E N+ RV +G+VI+R+ GIS + +R++ +GVGVE FP ++P + +I+V KVRRAKLYYLR Sbjct: 16 DIPNFRPGDTVRVHAKVVEGNRERVQIFEGVVISRKGQGISEMYTVRKISSGVGVERTFPTHTPRVEKIEVTRHGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRE4 (50S ribosomal protein L19 OS=Streptococcus equi subsp. equi (strain 4047) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 36/86 (41.86%), Postives = 60/86 (69.77%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R++ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGSRERIQIFEGVVISRKSQGISEMYTVRKISSGIGVERTFPIHTPRVEKIEVVRHGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_PASMU (50S ribosomal protein L19 OS=Pasteurella multocida GN=rplS PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 40/96 (41.67%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++ +P +PG +++KV V+ +KRR+ +G+VIA RN G+ + F LR++ GVGVE +F +SP + I V K VR+AKLYYLR++ Sbjct: 8 LEQEQLKQNLPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPIVDSITVKRKGAVRQAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_MYCVP (50S ribosomal protein L19 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 V+ + ++P PG V + V VI +K R+ KG+V+ R+ G+ TF +R+ GVGVE FP++SPNI I ++ + VRRAKLYYLR+ Sbjct: 7 VDQSSLRDDVPAFGPGDTVNVHVKVIEGSKERIQVFKGVVLRRQGGGVRETFTVRKESYGVGVERTFPVHSPNIDHIDIVSRGDVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_METPP (50S ribosomal protein L19 OS=Methylibium petroleiphilum (strain PM1) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 ++Q L++E + + + IP PG V + V V+ ++R+ +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR + Sbjct: 3 LIQTLEQEEIARLN--KTIPAFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRQR 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LEUMM (50S ribosomal protein L19 OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 E V + + + +IP + G V++ I E R RV +G+VI R+ AGI T+ +R++ +GVGVE FPL+SP + +I+V +VRRAKLYYLR Sbjct: 8 ENVTSAQLRTDIPAFRAGDTVKVYAKIVEGSRERVQLFEGVVIKRKGAGIQATYTVRKISSGVGVERTFPLHSPRVEKIEVTRFGQVRRAKLYYLR 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LEUCK (50S ribosomal protein L19 OS=Leuconostoc citreum (strain KM20) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 E V + + + +IP+ + G V++ I E R R+ +G+VI R+ +GI T+ +R++ +GVGVE FPL+SP + +I+V+ VRRAKLYYLR Sbjct: 8 ENVTSAQLRSDIPEFRAGDTVKVYAKIVEGSRERIQLFEGVVIKRKGSGIQATYTVRKISSGVGVERTFPLHSPRVEKIEVVRFGAVRRAKLYYLR 103 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |