CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_HAEDU (50S ribosomal protein L19 OS=Haemophilus ducreyi GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/96 (41.67%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++ +P +PG +++KV V+ +KRR+ +G+VIA RN G+ + F LR++ GVGVE + +SP I I V K VR+AKLYYLR++ Sbjct: 8 IEQEQLKQNVPSFRPGDTLEVKVWVVEGSKRRLQAFEGVVIAIRNRGLHSAFTLRKVSNGVGVERVLQTHSPIIDSIFVKRKGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAMJR (50S ribosomal protein L19 OS=Campylobacter jejuni (strain RM1221) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + +PD + G ++L + I E +K R+ +GI IARR G+S TF +R++ A VGVE +FP+YS ++ I VL + +VRRA+L+YLRD+ Sbjct: 17 KNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAMJJ (50S ribosomal protein L19 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + +PD + G ++L + I E +K R+ +GI IARR G+S TF +R++ A VGVE +FP+YS ++ I VL + +VRRA+L+YLRD+ Sbjct: 17 KNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAMJE (50S ribosomal protein L19 OS=Campylobacter jejuni GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + +PD + G ++L + I E +K R+ +GI IARR G+S TF +R++ A VGVE +FP+YS ++ I VL + +VRRA+L+YLRD+ Sbjct: 17 KNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKIGANNVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAMJD (50S ribosomal protein L19 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + +PD + G ++L + I E +K R+ +GI IARR G+S TF +R++ A VGVE +FP+YS ++ I VL + +VRRA+L+YLRD+ Sbjct: 17 KNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESIAVLRRGRVRRARLFYLRDR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAMJ8 (50S ribosomal protein L19 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 1 Query: 430 REIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + +PD + G ++L + I E +K R+ +GI IARR G+S TF +R++ A VGVE +FP+YS ++ I VL + +VRRA+L+YLRD+ Sbjct: 17 KNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKMGANNVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BLOFL (50S ribosomal protein L19 OS=Blochmannia floridanus GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 37/94 (39.36%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 412 ENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 E+ + +++IP + PG +V++ + +I NK+R +G++IA +N G+++ F +R++ +G GVE +F ++SP I EI + VRRAKLYYLR+ Sbjct: 9 ESNQMKKDIPPLHPGDVVEISLWIIEGNKKRFQIFEGMIIAIKNRGLNSAFTVRKISSGEGVERVFQIHSPVIKEINIKKIGVVRRAKLYYLRN 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_ACTSZ (50S ribosomal protein L19 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13 Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++ +P +PG +++KV + E KRR+ +G+VIA RN G+ + F LR++ G GVE +F +SP I I V K VR+AKLYYLR++ Sbjct: 8 LEEEQLKQNVPSFRPGDTLEVKVWVVEGAKRRLQAFEGVVIAIRNRGLHSAFTLRKVSNGTGVERVFQTHSPVIDSITVKRKGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_THICR (50S ribosomal protein L19 OS=Thiomicrospira crunogena (strain XCL-2) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 38/95 (40.00%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 +E + +E+P+ PG V ++V + E + R+ +G+VIA++N G++++F +R++ GVGVE F YSP + ++V + VRRAKLYYLRD Sbjct: 8 IEAEQMTKELPEFGPGDTVVVQVKVKEGSNERLQAYEGVVIAKKNRGLNSSFIVRKISHGVGVERTFQTYSPLVDSVEVKRRGDVRRAKLYYLRD 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRTR (50S ribosomal protein L19 OS=Streptococcus thermophilus GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |