CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRTD (50S ribosomal protein L19 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRT2 (50S ribosomal protein L19 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRT1 (50S ribosomal protein L19 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGTRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVDKIEVVRYGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_PROAC (50S ribosomal protein L19 OS=Propionibacterium acnes GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 + ++ + +IP+ +PG V++ V + E R RV GIVI+R G+ +F +R+L G GVE FPL+SP I +I+V VRRAKLYYLR + Sbjct: 6 DEIDKASMRDDIPEFRPGDSVKVHVKVVEGSRTRVQVFSGIVISRTGGGVQESFTVRKLSFGTGVERTFPLHSPIIDKIEVDRHGAVRRAKLYYLRGR 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LEPCP (50S ribosomal protein L19 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 ++Q L++E + + + IP PG V + V V+ ++R+ +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR + Sbjct: 3 LIQQLEQEEIARLN--KVIPVFAPGDTVIVSVNVVEGTRKRLQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIASIEVKRRGDVRRAKLYYLRQR 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_ENT38 (50S ribosomal protein L19 OS=Enterobacter sp. (strain 638) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP I I V + VR+AKLYYLR++ Sbjct: 8 IEQEQMKQDVPSFRPGDSVEVKVWVVEGTKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVIDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_DESMR (50S ribosomal protein L19 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 38/102 (37.25%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 M ++D+ +E + + +IP +PG +++ + +I K R+ +G V+ R G+ +TF +R++ GVGVE +FP++SP I I+V+ + KVRR++LYYLR Sbjct: 1 MNVIDQ--LEREQMRMDIPAFRPGDTIKVHLRIIEGEKERIQVFQGAVLRLRKGGVDSTFTVRKVSDGVGVERVFPMHSPFIERIEVVAQGKVRRSRLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CYTH3 (50S ribosomal protein L19 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 427 QREIPDIKPGYIVQLKVVIPEN-KRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 Q+ +P+ K G + + V I E K R+ +G+VI +RN+G +F +R++ AG+ VE +FP SP I +I+VL VRRA+L+YLRDK Sbjct: 16 QKALPEFKAGDTINVHVKIKEGAKERIQQYQGLVIQKRNSGNGASFTVRKISAGIAVERIFPTMSPFIDKIEVLRAGAVRRARLFYLRDK 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOBL (50S ribosomal protein L19 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOBK (50S ribosomal protein L19 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |