CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOBJ (50S ribosomal protein L19 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOBH (50S ribosomal protein L19 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOB6 (50S ribosomal protein L19 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLOB1 (50S ribosomal protein L19 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +A+E + + ++P+ G V++ I E R RV +G V+ R+N G TF +RR+ V VE FP+ SP I +I+V+ K KVRRAKLYYLRD++ Sbjct: 6 KAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPLIEKIQVVRKGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHISS (50S ribosomal protein L19 OS=Shigella sonnei (strain Ss046) GN=rplS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHIFL (50S ribosomal protein L19 OS=Shigella flexneri GN=rplS PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHIF8 (50S ribosomal protein L19 OS=Shigella flexneri serotype 5b (strain 8401) GN=rplS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHIDS (50S ribosomal protein L19 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rplS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHIBS (50S ribosomal protein L19 OS=Shigella boydii serotype 4 (strain Sb227) GN=rplS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SHIB3 (50S ribosomal protein L19 OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=rplS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 37/96 (38.54%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +E + ++++P +PG V++KV V+ +K+R+ +G+VIA RN G+ + F +R++ G GVE +F +SP + I V + VR+AKLYYLR++ Sbjct: 8 LEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRER 103 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |