CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUAB (50S ribosomal protein L19 OS=Brucella abortus GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUA2 (50S ribosomal protein L19 OS=Brucella abortus (strain 2308) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUA1 (50S ribosomal protein L19 OS=Brucella abortus (strain S19) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STAS1 (50S ribosomal protein L19 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 EAV + + ++P +PG +++ V I E R R+ +G+VI RR GIS TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR+ Sbjct: 8 EAVTQSQLRTDLPSFRPGDTLKVHVRIIEGTRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVSRRGKVRRAKLYYLRE 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_PELCD (50S ribosomal protein L19 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 M I+D+ +E +K ++IP K G +++ V I E +KRR+ +G+ I R N G+ +TF +R++ G+GVE +FPL+SPNI +I+V+ +VRRAKLYYLR Sbjct: 1 MNIIDRLEMEQMK--KDIPAFKAGDTLRVHVKIVEGDKRRIQVFQGVCIKRHNKGLGSTFTVRKISDGMGVERVFPLHSPNIDKIEVMMVGRVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_PARL1 (50S ribosomal protein L19 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +I++ +D+E + + + IPD PG +Q+ V + E R R+ +G+ IAR GI+ F +R++ G GVE +FPLYSP + IKV+ K +VRRAKLYYLR Sbjct: 2 NIIEQIDQEQMATLTGGKTIPDFAPGDTLQVNVKVVEGTRERLQAYEGVCIARAGGGINENFTVRKISYGEGVERVFPLYSPLVDSIKVVRKGRVRRAKLYYLR 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_NOSP7 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 47/98 (47.96%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 406 AVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 ++E + + +PDI G V++ V I E ++ RV +G+VIA+RN GI+ T +R++ GVGVE +F L+SP I IKVL + KVRRAKLYYLRD++ Sbjct: 9 SIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVFQGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRV 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_MYCA9 (50S ribosomal protein L19 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 V+ + ++PD +PG + + V VI +K R+ KG+V+ R G+S TF +R+ GVGVE FP++SPNI I++L + VRRAKLYYLR+ Sbjct: 7 VDQASLREDVPDFRPGDTINVHVKVIEGSKERIQVFKGVVLRRSGGGVSATFTVRKESYGVGVERTFPVHSPNIDHIEILTRGAVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_METS4 (50S ribosomal protein L19 OS=Methylobacterium sp. (strain 4-46) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+Q L++E + K + IPD +PG V + V + E +R RV +G+ I R +G++ F +R++ G GVE +FP+YSP I IKV + KVRRAKLYYLRD+ Sbjct: 2 NIIQQLEQEEI--AKLNKTIPDFEPGDTVIVNVKVKEGERTRVQAYEGVCIGRSGSGLNENFTVRKISYGEGVERVFPIYSPMIDSIKVTRRGKVRRAKLYYLRDR 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_METNO (50S ribosomal protein L19 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+Q L++E + + + IPD +PG V + V + E R RV +G+ IAR G++ F +R++ G GVE +FP+YSP I IKV+ + KVRRAKLYYLRD+ Sbjct: 2 NIIQQLEQEQIAQLN--KTIPDFEPGDTVVVNVKVKEGDRTRVQAYEGVCIARAGGGLNENFTVRKISYGEGVERVFPIYSPLIDSIKVVRRGKVRRAKLYYLRDR 105 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |