CF832025

Overview
NameCF832025
Unique NameCF832025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.269e-34
Identity = 94/220 (42.73%), Postives = 126/220 (57.27%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            I MG ++  VE +P GN  A+ GL   I  +   T   + +  P   +K    PV+ VAV+ K   DLPKL+E L++ AK DP +  TI EE+GEH++AG GELHLEI    +Q D   G EI  S P+V +RE+V  KS   V  KSPN HNR Y+E  PLE G+ E + DG+I  + +   R KIL E  G DK+ A+ +  F     G NM ++M K
Sbjct:  340 IMMGAERIEVERIPAGNIAAVTGLRDAIVGS---TVSSDPNMTPFEIIKHVSEPVMTVAVEAKNMRDLPKLIEVLRQTAKEDPTLQITINEETGEHLMAGMGELHLEIVATRIQRD--KGVEIKTSPPIVVYRESVTGKS-GPVEGKSPNHHNRFYIEIEPLEPGVIEVLKDGKIDMKMEEVERRKILIEA-GMDKEEARNMVNF----VGTNMFLNMTK 548          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.194e-32
Identity = 90/220 (40.91%), Postives = 124/220 (56.36%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            I+MG K+  VE++  GN  A+ GL   I   +T+T+  E+   P  ++K    PV+ VAV+ K   DLPKLVE L+++AK DP +   I EE+GEH+++G GELHLEI    ++ D   G EI+ S+P+V +RETV  K    V  KSPN+HNR Y    PL E +   I  G I        R  +L +  G DKD AK +        G NM++DM K
Sbjct:  341 IFMGPKRVEVEEIVAGNIAAVTGLKDAIV-GSTVTSLMEMS--PFESLKHYSEPVMTVAVEAKNMKDLPKLVEVLRQVAKEDPTLGIAINEETGEHLISGMGELHLEIVTGRIKRD--KGVEIVTSEPIVVYRETVTGK-VEDVEGKSPNRHNRFYFTLEPLPEEIVNLIKAGEITMNQQAIERRDVLLKA-GMDKDEAKNV----KHIKGTNMLIDMTK 549          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 83/204 (40.69%), Postives = 124/204 (60.78%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  LQ D+  G E+  S+P+V +RE++ + S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D D+A+ +
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLA-ELGMDYDIARGV 535          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 83/204 (40.69%), Postives = 124/204 (60.78%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  LQ D+  G E+  S+P+V +RE++ + S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D D+A+ +
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLA-ELGMDYDIARGV 535          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 75/203 (36.95%), Postives = 124/203 (61.08%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFIT-KNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            ++MG  +E  E++P GN  A +GLDQ  + + A     K+ +     ++ +   PVV ++V+ K   DL K+++ L++L+  DP ++  I EE+GE++++G G LHLE+ L+ L++++  G +++ S P+V +RE++  KS +    KSPNKHN+LY+   PL E   E I +G I    D K  ++IL E+  WD D AKKI
Sbjct:  342 LYMGPTRELAEEIPAGNIAAALGLDQARSGETAVDIKYKDANVGSFESLHYVSEPVVTISVEPKNPKDLNKMIDALRKLSIEDPNLLVKINEETGEYLLSGMGFLHLEVSLQLLKENY--GVDVVTSPPIVVYRESIRTKS-QVFEGKSPNKHNKLYISVEPLNEQTIELIANGTIKEDMDSKEMARILKEQADWDYDEAKKI 541          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 84/204 (41.18%), Postives = 124/204 (60.78%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ ++  PVV VA++ K   DLPKLVE L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ ++    E+  S P+V +RE+V ++S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D ++AK I
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVSVQQIE----PFEALHYTSEPVVTVAIEAKNVKDLPKLVEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLHRLKTEWKLDVEV--SPPIVVYRESVTKQS-PIVEGKSPNKHNRFYITVEPMPDEIYQAIREGEIPEGRPKDPKAVAKKLA-ELGMDYEIAKGI 535          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METST (Elongation factor 2 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=fusA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.011e-31
Identity = 81/206 (39.32%), Postives = 122/206 (59.22%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILS---EEFGWDKDLAKKIW 610
            ++MG ++   + VP GN VA+ G    I    T+T + + +  P  +++    PVV VAV+ K   DLPKL+E L+++ K DP +   I EE+GEH++AG GELHLE+ +  + D    G E+  S+P+V +RET+   +   V  KSPNKHNR Y++  PL + L  AI +G I    + + + K L+   +E G DKD AKK+W
Sbjct:  340 VYMGPERINTDSVPAGNIVAITGARGAIA-GETIT-DADHNIAPFESLEHISEPVVTVAVEAKNTKDLPKLIEVLRQVGKEDPTLRVEINEETGEHLIAGMGELHLEVIIYRINDK---GLEVETSEPIVVYRETI-AGTATNVEGKSPNKHNRFYIDIEPLSDDLMNAISEGEI---PEGRVKGKELAKTFQEHGLDKDEAKKVW 536          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.320e-31
Identity = 86/217 (39.63%), Postives = 121/217 (55.76%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVD 652
            I+MG  +  V  +P GN VA++G+D+      TL + +  D  P   M++   PVV VA++ K  ++L KLVE LK L   DP +   I+ E+G+ +++G G LHLEI    L++      E   S P++ FRETV E+S +    KSPNKHNRLY    PL+E   E I    I    DP+ R+KIL E+ GWD D A+ IW         N++VD
Sbjct:  344 IYMGPSRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRISDIPPFEKMRYIAEPVVTVAIEPKNPAELAKLVEALKDLVIEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKE--RSKTEFTVSPPLIRFRETVRERS-QVWEGKSPNKHNRLYFYVEPLDETTIELIATKEITEDQDPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVD 554          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.320e-31
Identity = 74/190 (38.95%), Postives = 117/190 (61.58%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSE 571
            ++MG ++  V+++P GN VA++GL   +  +   T E   +  P  ++K    PVV +A++ K   DLPKL+E L++LAK DP +  T+ EE+GEH+++G GELHLE+ ++ ++ D+    ++I S P+V FRETV   S   V  KSPNKHNR Y+   PL E + +   +G +  + D K R ++L E
Sbjct:  338 LYMGPRRVEVDEIPAGNIVAVIGLKDAVAGSTCTTVE---NLTPFESIKHYSEPVVTMAIEAKNPRDLPKLIEVLRKLAKEDPTLHITLNEETGEHLISGMGELHLEVKVEKIRRDYK--LDVITSPPIVVFRETVTGTS-PVVEGKSPNKHNRFYIVVEPLPEKVIQMFKEGVVDMKMDKKERRRLLQE 521          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 84/217 (38.71%), Postives = 121/217 (55.76%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVD 652
            I+MG  +  V  +P GN VA++G+D+      TL + +  +  P   M++   PVV VA++ K  ++L KLVE LK L   DP +   I+ E+G+ +++G G LHLEI    L++      E   S P++ FRETV E+S +    KSPNKHN+LY    PL+E   E I    I    DP+ R+KIL E+ GWD D A+ IW         N++VD
Sbjct:  344 IYMGPTRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRLTEVPPFEKMRYIAEPVVTVAIEPKNPAELAKLVEALKDLVIEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKE--RAKTEFTVSPPLIRFRETVRERS-QVWEGKSPNKHNKLYFYVEPLDETTVELIATKEITEEQDPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVD 554          
The following BLAST results are available for this feature:
BLAST of CF832025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
EF2_METTP8.269e-3442.73Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_METB61.194e-3240.91Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_PYRWO4.537e-3240.69Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRFU4.537e-3240.69Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_SULTO1.011e-3136.95Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_PYRKO1.011e-3141.18Elongation factor 2 OS=Pyrococcus kodakaraensis GN... [more]
EF2_METST1.011e-3139.32Elongation factor 2 OS=Methanosphaera stadtmanae (... [more]
EF2_PYRIL1.320e-3139.63Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_ARCFU1.320e-3138.95Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_PYRAR2.252e-3138.71Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832025 ID=CF832025; Name=CF832025; organism=Citrus sinensis; type=EST; length=662bp
ACGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGGTCGTTG
ATATGTGTAAGG
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