CF832025

Overview
NameCF832025
Unique NameCF832025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 71/202 (35.15%), Postives = 120/202 (59.41%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            ++MG  +E  E++P GN  A++GLD+  +    ++            + +   PVV +AV+ K   DL K+++ L++L+  DP +V  I EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  WD D AK+I
Sbjct:  342 LYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRI 540          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 71/202 (35.15%), Postives = 120/202 (59.41%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            ++MG  +E  E++P GN  A++GLD+  +    ++            + +   PVV +AV+ K   DL K+++ L++L+  DP +V  I EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  WD D AK+I
Sbjct:  342 LYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRI 540          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 71/202 (35.15%), Postives = 120/202 (59.41%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            ++MG  +E  E++P GN  A++GLD+  +    ++            + +   PVV +AV+ K   DL K+++ L++L+  DP +V  I EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  WD D AK+I
Sbjct:  342 LYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRI 540          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 71/202 (35.15%), Postives = 120/202 (59.41%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            ++MG  +E  E++P GN  A++GLD+  +    ++            + +   PVV +AV+ K   DL K+++ L++L+  DP +V  I EE+GE++++G G LHLE+ L+ L++++  G +++ + P+V +RE++  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL +E  WD D AK+I
Sbjct:  342 LYMGPTRELAEEIPAGNIAAVLGLDRARSGETAISVGFSNVQGSFERLHYISEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHLEVSLQLLRENY--GIDVVTTPPIVVYRESIRAKS-QVFEGKSPNKHNKFYLSVEPLNDKTIELISNGTIREDMDSKEMAKILRDEASWDYDEAKRI 540          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.252e-30
Identity = 76/206 (36.89%), Postives = 119/206 (57.77%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEF---GWDKDLAKKIW 610
            ++MG ++   + VP GN VA+ G    +         +++ A     ++    PVV VAV+ K   DLPKL+E L+++ K DP V   I EE+GEH+++G GELHLEI    + +    G EI  S+P+V +RETV   +   V  KSPNKHNR Y+E  P+E  + +AI +G+I    + + + K +++ F   G DK+ A+++W
Sbjct:  340 VYMGPERVNTDKVPAGNIVAITGAKNAVAGETICDTGRKIKA--FEGLEHISEPVVTVAVEAKNTKDLPKLIEVLRQVGKEDPTVRVEINEETGEHLISGMGELHLEIIAYRINEK---GVEIETSEPIVVYRETVAG-TAGPVEGKSPNKHNRFYIEIEPVEASVMQAIQEGKI---KEGRVKGKEMAKNFIEAGMDKEEARRVW 536          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 72/208 (34.62%), Postives = 118/208 (56.73%), Query Frame = 2
Query:   32 VEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVD 652
            V+    G  V + G+D  I+K AT+ ++  + D +  R +      V +VAV+    S+LPKL++GL++  KS P+ +  +EESGEH + G GE++++  L DL+  +    EI  SDPV  F ET ++ S     S +PNK NR+ M   PLE+G++  I++G++      K  S+   + + WD   ++ IW FGP+  G N++ D
Sbjct:  554 VDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLY-SEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRD 760          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 74/203 (36.45%), Postives = 123/203 (60.59%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH-PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKI 607
            I+MG+ +E  +++P GN  A++GL++      TL + +  D       + +   PVV +AV+ K   DL K+++ L++L+  DP +V  I EE+GE++++G G LH+E+ L+ L+D++  G +++ + P+V +RE+V  KS +    KSPNKHN+ Y+   PL +   E I +G I    D K  +KIL ++  WD D AKKI
Sbjct:  342 IYMGQFRELADEIPAGNIAAVLGLER-ARSGETLIDIRYKDLQGSFEKLHYVSEPVVTIAVEPKNPKDLTKMIDALRKLSIEDPNLVVKINEETGEYLLSGMGFLHVEVSLQLLKDNY--GVDVVTTPPIVVYRESVRNKS-QVFEGKSPNKHNKFYISVEPLNDKTIELISNGTIKEDMDSKEMAKILRDQADWDYDEAKKI 540          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 78/204 (38.24%), Postives = 123/204 (60.29%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  +E VP GN VA+ GL   +          E    P  A+ ++  PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L++ +  G ++  S+P+V +RE++ ++S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   D K  +K L+ E G D ++A+ I
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVA----EEPIEPFEALHYTSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLVHLKEQW--GVDVDVSEPIVVYRESITKQS-PIVEGKSPNKHNRFYIVVEPMPDEIYQAIREGEIPEGRPKDTKVVAKKLA-ELGMDYEIARGI 535          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 80/203 (39.41%), Postives = 120/203 (59.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKI 607
            ++MG ++  V+ +P GN  A+ GL   I  +   T +      P  +++ +  PVV VAV+ K   DLPKLVE L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +G I  R  + + R K+++   G DKD AK+I
Sbjct:  340 VFMGPERLEVDKIPAGNIAAVTGLRDAIVGSTVTTLD---GMSPFESIRHASEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEISTTPPIVVYRETI-TGTAGPVEGKSPNRHNRFYVVVEPLEPEVRELIREGEISMRMPELERREKLIAA--GLDKDEAKRI 534          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 84/222 (37.84%), Postives = 128/222 (57.66%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ D+  G +I  S+P+V +RE++  KS   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+ E G D ++A+ I     +    NM +D  K
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLKKDW--GIDIEVSEPIVVYRESI-TKSSPMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRVKNPKEVAKKLA-ELGMDYEIARGI----VDIYNGNMFIDNTK 549          
The following BLAST results are available for this feature:
BLAST of CF832025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
EF2_SULIM3.252e-3035.15Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL3.252e-3035.15Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK3.252e-3035.15Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA3.252e-3035.15Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_METTH3.252e-3036.89Elongation factor 2 OS=Methanobacterium thermoauto... [more]
SN114_SCHPO4.247e-3034.62114 kDa U5 small nuclear ribonucleoprotein compone... [more]
EF2_METS54.247e-3036.45Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_THESM5.547e-3038.24Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_METMT5.547e-3039.41Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_PYRHO7.244e-3037.84Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832025 ID=CF832025; Name=CF832025; organism=Citrus sinensis; type=EST; length=662bp
ACGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGGTCGTTG
ATATGTGTAAGG
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