CF832025

Overview
NameCF832025
Unique NameCF832025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 77/220 (35.00%), Postives = 126/220 (57.27%), Query Frame = 2
Query:   11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILS--EEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            +G  +  ++++  GN VA++GL   I   A  T     D  P   M     PVV +A++ K  +DLPKL++ L+ ++K+DP +   I +E+GEH+++G GELHLE+ +  +++D+    +++ S+P+V +RETV +K       KSPNKHNR Y +  PL E +  AI DG+I      K +  +++  EE G   D A+ + C      G N+++DM K
Sbjct:  341 VGPDRIPIDEIAAGNIVAIIGLKGAI---AGSTVSSLSDMEPFEPMTHYTDPVVTLAIEAKHTADLPKLIDVLRTISKADPSIQVDINQETGEHLISGMGELHLEVTIYRIKNDYK--VDVVTSEPLVVYRETV-DKKGGPFEGKSPNKHNRFYFQVEPLPENVVSAILDGKIPEGSKFKDKKAVMANLEEAGLTHDEARGLVCI----YGTNVMLDMTK 550          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 80/207 (38.65%), Postives = 121/207 (58.45%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDP-KARSKILSE--EFGWDKDLAKKIWC 613
            ++MG ++  V+ +  GN  A+VGL +        + +K ++  P  A+     PV+ VA++ K   DLPKL+E L+++A+ DP V   I EE+GEH+++G GELH+EI  K L+ +   G  +    P+V +RETV  +S   V SKSPNKHN+LY    PLEE + +A  +GRI   D   K   KI+ E  + G D + AK++ C
Sbjct:  340 VFMGPERIPVDSISAGNICALVGLKEASAGETICSPDKIIE--PFEAITHISEPVITVAIEAKNTKDLPKLIEVLRQVAREDPTVKVEINEETGEHLLSGMGELHIEIITK-LKIERDAGIPVEVGQPIVVYRETVTGQS-PVVESKSPNKHNKLYFVVEPLEESVLQAYKEGRIPDVDTKRKLDDKIVQELIKAGMDPEEAKRVMC 542          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 77/203 (37.93%), Postives = 115/203 (56.65%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIW 610
            ++ G ++   + VP GN V + G    I      + E ++       +     PVV VAV+ K   DLPKL+E L+++AK DP +   I EE+GEH+V+G GELHLE+    ++D    G EI  S+P+V +RETV + S + V  KSPNKHNR Y+   PLE+ L +A+ +G++         S     E+G DK+ A+K+W
Sbjct:  340 VYFGPERVNTDAVPAGNIVYVAGAKGAIAGETICSPEDKIKE--FEGLDHISEPVVTVAVEAKNTKDLPKLIEVLRQVAKEDPTIKVEINEETGEHLVSGMGELHLEVISYRIKDK---GVEIQTSEPIVVYRETVSQLSPQ-VEGKSPNKHNRFYITVEPLEDELFKALQEGKLKEGKVKGKESANDFMEYGLDKEEARKVW 536          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.236e-29
Identity = 76/218 (34.86%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 655
            ++MG  +E  +++  GN  A + L++  +    +  + +    P   ++     VV VA++ K    L KLV+ L +L   DP ++  I EE+GE++++G G LH+EI L  L+D +  G E++ S PV+ +RETV E S +    KSPNKHN+ Y+   PL E     + +G I    D + R+KIL E+ GWD D A++I          NM+VDM
Sbjct:  339 LYMGPYRELADEITAGNIAAALALEKARSGETVVAMKYKDSMTPFEKLRMITESVVTVAIEPKNPQQLTKLVDALYKLHLEDPSLIVKINEETGEYLLSGVGTLHIEIALTLLKDLY--GLEVVASPPVIVYRETVRESS-QVFEGKSPNKHNKFYISVAPLNEETLRLMSEGIIVEDMDARERAKILREQAGWDADEARRIMAIDENL---NMLVDM 550          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 81/203 (39.90%), Postives = 115/203 (56.65%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  VE +P GN  A+ GL   I  +   T +      P  +++    PVV VAV+ K   DLPKLVE L+++AK DP +  T+ EE+GEH++AG GELHLE+    +Q D     EI  S P+V +RET+ +K    V  KSPN+HNR Y+   PL+  + E I  G I     + + R K++  E G  K+ AK I
Sbjct:  340 IFMGPERLEVEKIPAGNIAAVTGLKDAIVGSTVTTLDGMT---PFESIRHVSEPVVTVAVEAKHTKDLPKLVEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIQRD--KNVEITTSKPIVVYRETI-KKKIEPVEGKSPNRHNRFYIYVEPLDTAIVEMIKSGDISMNLPELERRQKLI--ELGMGKEEAKGI 534          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 78/203 (38.42%), Postives = 117/203 (57.64%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKI 607
            I+MG ++  V+ +P GN  A+ GL   I  +   T +      P  +++    PVV VAV+ K   DLPKL+E L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RET+ +K    +  KSPN+HNR Y+   PL+  +  AI +G I     + + R K++  E G DK+ AK I
Sbjct:  340 IFMGPERLEVDKIPAGNIAAVTGLKDAIVGSTVTTLDGMT---PFESIRHVSEPVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRETI-KKKTEPIEGKSPNRHNRFYISVEPLDLEIVSAIKEGEITMNMPELERRQKLI--ELGMDKEQAKGI 534          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 83/204 (40.69%), Postives = 125/204 (61.27%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGL-DQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKI 607
            ++MG ++  V+ +P GN  A+ GL D F+   AT+T  + ++  P  ++K +  PVV VAV+ K   DLPKLVE L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D   G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +  I  R  + + R K+++   G +KD AKKI
Sbjct:  340 VFMGPERLEVDAIPAGNIAAVTGLRDAFV--GATVTTLEGME--PFESIKHASEPVVTVAVEAKHMKDLPKLVEVLRQVAKEDPTLKITLDEETGEHLMAGMGELHLEVIAHRIERD--KGVEITTTPPLVVYRETI-TGTAGPVEGKSPNRHNRFYVIVEPLEPEVRELIRNDEISMRMPEVERREKLMAA--GLNKDEAKKI 534          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 80/221 (36.20%), Postives = 125/221 (56.56%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            I+MG ++  V+ +P GN  A+ GL + I  +   T +      P  +++    PVV VAV+ K   DLPKL+E L+++AK DP +  T+ EE+GEH++AG GELHLE+    ++ D     EI  S P+V +RET+ +K    +  KSPN+HNR Y+ A PL+  +  AI +G +     + + R K++  + G +K+ AK I          N+ +DM K
Sbjct:  340 IFMGPERLEVDKIPAGNIAAVTGLKEAIVGSTVTTLDGMT---PFESIRHVSEPVVTVAVEAKHTKDLPKLIEVLRQVAKEDPTLQITLDEETGEHLMAGMGELHLEVIAHRIERD--KNVEITTSKPIVVYRETI-KKKTEPIEGKSPNRHNRFYIYAEPLDTEIVSAIKEGEVSMNLPELERRQKLI--DLGMEKEEAKGI----VGIFNSNIFIDMTK 548          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.753e-29
Identity = 72/218 (33.03%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDM 655
            ++MG  +E  +++  GN  A +GL++  +    ++ + +    P   +K     VV VA++ K      KL++ L +L   DP ++  I EE+GE++++G G LH+EI L  L+D +  G E++ S PV+ +RET+ ++S +    KSPNKHN+ Y+   PL E     + +G I    D + R+KIL E+ GWD D A++I          N+++DM
Sbjct:  341 LYMGPYRELADEITAGNIAAALGLEKARSGETVVSMKYKDTMTPFEKLKMITESVVTVAIEPKNPQQTTKLIDALYKLHLEDPSLIVKINEETGEYLLSGVGTLHIEIALTLLKDLY--GLEVVTSPPVIVYRETIRDRS-QVFEGKSPNKHNKFYISVTPLNEETLRLLSEGIIMEDMDARERAKILREQAGWDADEARRIMAIDENL---NILIDM 552          
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.696e-29
Identity = 82/221 (37.10%), Postives = 126/221 (57.01%), Query Frame = 2
Query:   11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI---GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661
            +G  +  V+++  GN  A+VGL   I      + E  V   P   M     PVV +A++ K  +DLP+L+E L+ ++K+DP +   I +E+GEH+++G GELHL++ L  +++D+    E+  SDP+V +RETV EK       KSPNKHNR Y E  PL+  + +AI+DG I       D KA  ++L  + G D+D AK + C      G NM+ D+ +
Sbjct:  341 VGPDRIPVDEITAGNIAAIVGLKGAIAGATVSSLENMV---PFEPMIHYSEPVVTLAIEAKHTADLPRLIEVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKALVELLVSK-GIDRDEAKGLVC----VEGTNMMFDVTR 550          
The following BLAST results are available for this feature:
BLAST of CF832025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
EF2_PICTO7.244e-3035.00Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METJA7.244e-3038.65Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METS31.236e-2937.93Elongation factor 2 OS=Methanobrevibacter smithii ... [more]
EF2_DESMO1.236e-2934.86Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_METTE1.614e-2939.90Elongation factor 2 OS=Methanosarcina thermophila ... [more]
EF2_METMA1.614e-2938.42Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_METBU1.614e-2940.69Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METAC1.614e-2936.20Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_DESK12.753e-2933.03Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_THEAC4.696e-2937.10Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832025 ID=CF832025; Name=CF832025; organism=Citrus sinensis; type=EST; length=662bp
ACGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGGTCGTTG
ATATGTGTAAGG
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