CF832025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.670e-26 Identity = 75/225 (33.33%), Postives = 127/225 (56.44%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK-----ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661 I+MG ++ V + GN A+ GL + T T+ + ++ ++ + PV+ VA++ K DLPKL+E L+++ + D V I EE+GEH+++G GELH+E+ + + + GG E+ +P++ +RET+ S + KSPNKHN+LYM A P+EE + A +G+I D K A ++++ E G +++ AKK+ NM+V+M K Sbjct: 340 IFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSKILEPGFESLTHTSEPVITVAIEAKNTKDLPKLIEILRQIGREDNTVRIEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIIVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKIHDEDFKKKTNVDAETRLI--EAGLEREQAKKVM----SIYNGNMIVNMTK 555
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25 Identity = 69/220 (31.36%), Postives = 123/220 (55.91%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661 I+MG ++E V++VP GN A+ GL I +T++NE+ P ++ PV+ +++ + DLPKL+E L++++K DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D K Sbjct: 341 IYMGGEREEVDEVPAGNIAAVTGLKDAIA-GSTVSNEEMT---PFESIDHISEPVITKSIEAQNMDDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTK 548
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25 Identity = 69/220 (31.36%), Postives = 123/220 (55.91%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCK 661 I+MG ++E V++VP GN A+ GL I +T++NE+ P ++ PV+ +++ + DLPKL+E L++++K DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + G N+ +D K Sbjct: 341 IYMGGEREEVDEVPAGNIAAVTGLKDAIA-GSTVSNEEMT---PFESIDHISEPVITKSIEAQNMDDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTK 548
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.164e-25 Identity = 82/274 (29.93%), Postives = 128/274 (46.72%), Query Frame = 2 Query: 11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEG-----------------LAEAIDDGRIGPRDDPKARSKILSEEFGWDKDL--------AKKIWCFGPETTGPNMVV 649 MG++ E +E+VP GN + + GL F+ K+ATL + P + F +P+VRVAV+ K S++P+LV+G+K L ++DP V I+E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRET+ + S + +PNK L + A PL E L ++++GR K + KI + +K L +IW FGP GPN++V Sbjct: 567 MGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCSLPSCP--PFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQVLIQETGEHVLVTAGEVHLQRCLDDLRERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGRQQKVAVIHQTKEEQSKIPEGIHVDSDGLITIPTPNKLATLSVRAIPLPEEVTRILEENSDLIRSMELLTSSLNEGRNTQAIHQKTQEKIWEFKGKLEKHLTGRKWRNTVDQIWSFGPRKCGPNILV 837
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24 Identity = 78/275 (28.36%), Postives = 131/275 (47.64%), Query Frame = 2 Query: 11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------------------------------------KSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKI-----------LSEEFGWD--------------KDLAKKIWCFGPETTGPNMVVD 652 MG++ E +E+VP GN + + GL F+ K+ATL + P + F +P+VRVAV+ K S++P+LV+G+K L ++DP V I+E+GEH++ AGE+HL+ CL DL++ F I S+P++ FRET+ + S + +PNK L + A PL E + + +++ R + S + ++E W+ +++ +IW FGP GPN++V+ Sbjct: 567 MGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCSLPSCP--PFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERF-AKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVN 838
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.028e-23 Identity = 70/205 (34.15%), Postives = 112/205 (54.63%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSE---EFGWDKDLAKKI 607 ++MG ++ V V GN A+ GL + + T+ + + ++ PV+ VA++ K DLPKL++ L+++AK D V I EE+GEH+++G GELH+E+ + + + G E+ +P+V +RE V S V KSPNKHNRLY A PL+E + A +G I D K K + E G +++ AK++ Sbjct: 340 VFMGAERVQVPSVSAGNICALTGLKE-ASAGETVCSPNTILDPSFESITHVSEPVITVAIEAKNTKDLPKLIDVLRQIAKEDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDAGVEVDVGEPIVVYREAVNGVSPE-VEGKSPNKHNRLYFVAEPLDECVYNAHVEGLIKDEDFKKKTPKEVETKLVEIGMNREEAKRV 541
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21 Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS 421 ++MGK+ ++ P GN V + GL + K+ TL EK V + + F +P+VRVAV+ ++ KLV GLK L ++DP V +E +GEHI+ AGELHLE CLKDL + F G EI S+P + +RET L S Sbjct: 625 LFMGKELVPLDVCPSGNIVGIRGLAGKVLKSGTLI-EKGVQGVNLAGVNFHFTPIVRVAVEPANPVEMSKLVRGLKLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTERF-AGIEITHSEPAIPYRETFLSAS 761
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.583e-19 Identity = 79/267 (29.59%), Postives = 121/267 (45.32%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV-------------------------------------------LEKSCRTVMSKSPN--KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEE---FGWDKDLAKKIWCFGPETTGPNMVVDMCK 661 + MG++ +E VP GN A+ GL + + ATL + + + + + P+VRVA++ ++ KLV GL L ++DP V +EE+GEH++ AGE+HLE CLKDL++ F EI S P+V +RET L K +T+ + S N K NR + + L + + E + P + SK+L EE G K+ I FGP+ GPN++ D K Sbjct: 511 LMMGQELVYLETVPAGNVFAIGGLAGTVLRTATLCSSP--NGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKDLRERF-AKIEIQASQPLVPYRETTIATPDLLAKNKELSIGFVTATLPVGGVTIGITVTPLSGSVVDFLLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLT-----PEKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTK 769
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.417e-17 Identity = 56/169 (33.14%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKE---VDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGL 499 ++ G ++ +E+ GN +A+ G+ + + E + + P A+K PVV A++ K DLPKL+E LK + K DP + I +ESG+ +++G G+LHLEI +++DF +II S+P+V +RE+V + V KSPNK N+ Y+ + + L Sbjct: 346 VFKGIQKIQIEEAKAGNIIAISGVRDLQSGETIVEPEPDGSKPNIPPFEAIKHIFDPVVTKAIEPKDPRDLPKLIEVLKLIQKEDPTLKVEIDQESGQILISGLGDLHLEIVEYRIKNDFK--VDIITSNPIVVYRESV-KGQAGPVEGKSPNKLNKFYITVEKMPDEL 511
BLAST of CF832025 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.185e-17 Identity = 60/223 (26.91%), Postives = 111/223 (49.78%), Query Frame = 2 Query: 14 GKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMK---FSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTV-MSKSPNKHNR-------LYMEARPLEEGLAEAIDDGRIGP----------RDDPKARSKILSEEFGWDKDLAKKIWCF 616 G+ V + G V + G+ K+ATL + K + D ++ K + V ++ +Q + +LPKL++ L +++K P V+ +EESGEH++ G GEL+++ L DL+ + EI SDP+ F E+ +S ++ +S S ++ + + A P++ + + + +G D+P+ SKIL E+GWD ++ +W F Sbjct: 547 GRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITEAVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESGEHVILGNGELYMDCLLYDLRASY-AKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYGWDSLASRNVWSF 768 The following BLAST results are available for this feature:
BLAST of CF832025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832025 ID=CF832025; Name=CF832025; organism=Citrus sinensis; type=EST; length=662bpback to top |