CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SHESA (50S ribosomal protein L2 OS=Shewanella sp. (strain ANA-3) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SHEPC (50S ribosomal protein L2 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SHEON (50S ribosomal protein L2 OS=Shewanella oneidensis GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 50/133 (37.59%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G +A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG-----AKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_NITWN (50S ribosomal protein L2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G + GNV+P+ ++P G +V NVE +G G LAR++G YA I+ D D ++L SG ++++ CR IG V+ + KAG R N RGV MNP++HPHGGG + G Sbjct: 116 VVAGNYVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGR--DQDYVILRLNSGEQRLVHGRCRGAIGAVSNPDHMNTSVGKAGRTRWMGRRPHN-----RGVVMNPIDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_METPB (50S ribosomal protein L2 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = -2 Query: 369 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTV 782 V G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P RGVAMNPV+HPHGGG + G + V Sbjct: 117 VVAGESVDVKPGNAGPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFASVGAVSNPDHMNISLGKAG---------RNRWLGKRPHNRGVAMNPVDHPHGGGEGRTSGGRNPV 247
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_EHRCR (50S ribosomal protein L2 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = -2 Query: 369 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTV 782 V G A ++ GN L ++SIP G V NVE G+ GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KAG R+ W P VRGVAMNP++HPHGGG + G + V Sbjct: 116 VISGDGADILPGNCLLLKSIPVGTFVHNVELRPGNGGVIARSAGTYAQLMS--KDGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKAG---------RSRWLGIRPTVRGVAMNPIDHPHGGGEGKTSGGRNPV 246
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_CLOB6 (50S ribosomal protein L2 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = -2 Query: 375 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 782 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTNEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ANATD (50S ribosomal protein L2 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 381 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQ-HIGH 782 V G A + VGN LP+++IP G ++ N+E G G L R++G A +++ + +KLPSG + + CRA IGQV + KAG R W P VRG AMNPV+HPHGGG + IGH Sbjct: 117 VMSGPDADIKVGNALPLKNIPVGTMIHNIELMPGKGGQLCRSAGSVAQLMA--KEGKYALIKLPSGELRYVSQECRATIGQVGNLDHENVRIGKAG---------RKRWMGIRPTVRGSAMNPVDHPHGGGEGKAPIGH 244
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ACIC5 (50S ribosomal protein L2 OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 52/139 (37.41%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 384 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 788 Q + G +A ++VGN LP+++IP G V NVE G + R++G A +++ + D +KLPSG + + C A IGQV + KAG RN W P RGV MNPV+HPHGGG + G Sbjct: 114 QTIMSGPEADILVGNALPLKNIPAGTTVHNVELRPGKGAQMVRSAGASAQLVA--KEGDYALLKLPSGETRRVLINCMATIGQVGNTDHENVSIGKAG---------RNRWKGIRPTNRGVTMNPVDHPHGGGEGKTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ACAM1 (50S ribosomal protein L2 OS=Acaryochloris marina (strain MBIC 11017) GN=rplB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 782 + G A + VGN LP+ IP G V NVE G G LARA+G A +++ + +KLPSG ++ C A IGQV + KAG ++++ +R PKVRG MNPV+HPHGGG Sbjct: 116 IVAGPDAPIEVGNALPLERIPLGTEVHNVELIPGKGGQLARAAGALAQVVA--KEGKMVTLKLPSGEVRLFQKECYATIGQVGNVESNNITIGKAGR--NRWKARR---PKVRGSVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |