CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_CUSGR (50S ribosomal protein L2, plastid OS=Cuscuta gronovii GN=rpl2 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 782 + G + ++ +GN LP+ IP G + N+E G G LARA+G A +I+ + + +KLPSG + I C A +GQV G +K L KAG ++ KR P VRG+ MNP++HPHGGG Sbjct: 111 IISGPEVSIKIGNSLPLNEIPLGTSLHNLEITRGKGGQLARAAGAAAKLIA--KEGQSATLKLPSGELRFISKQCSATVGQVGNIGVNQKSLGKAG--VKRWLGKR---PIVRGLVMNPIDHPHGGG 230
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_CHLAT (50S ribosomal protein L2, chloroplastic OS=Chlorokybus atmophyticus GN=rpl2 PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G A L +GN LP+ IP G + N+E G G L RA+G A +++ + V+LPSG +++ C A IGQV + + KAG R W PKVRGV MNPV+HPHGGG Sbjct: 116 IIAGPDAPLQLGNALPLSKIPLGTGIHNIEVSPGQGGKLVRAAGGVAQLVAK--EGSYVTVRLPSGEVRLVLKECSATIGQVGNVDASNVTIGKAG---------RKRWLGQRPKVRGVVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SYMTH (50S ribosomal protein L2 OS=Symbiobacterium thermophilum GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH-KFRVKRNCWPKVRGVAMNPVEHPHGGG 782 V G A + VGN LP+ +IP G +V N+E + G G L R++G A I++ + ++LPSG ++ + CRA +GQV + KAG H FR P VRGV MNPV+HPHGGG Sbjct: 117 VVSGPDADIKVGNALPLENIPVGTIVHNIELYPGRGGQLVRSAGASAQIMA--KEGRYALLRLPSGEQRKVLLACRATVGQVGNLEHENIVIGKAGRKRHLGFR------PAVRGVVMNPVDHPHGGG 236
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_NOSP7 (50S ribosomal protein L2 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 55/131 (41.98%), Postives = 70/131 (53.44%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G ++ GN LP+ IP G V NVE G G + RA+G A +++ + D +KLPSG ++I C A IGQV G T+ L AG A RN W PKVRG MNPV+HPHGGG Sbjct: 116 IISGPESPFEDGNALPLSRIPLGTSVHNVEMTPGKGGQIVRAAGASAQVVAK--EGDYVTLKLPSGEVRLIRRDCYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_MYCH7 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 58/150 (38.67%), Postives = 76/150 (50.67%), Query Frame = -2 Query: 342 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 788 Q + G K+ ++VGN LP+ IPEG V N+E G L R++G +A I + D +KL SG + I + CRA IG V + + KAG HK P VRG MNP +HPHGGG Q IG S + P G+K Sbjct: 115 QKISSGPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRDEDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGGEGKQPIGRKSPL---TPWGKK 256
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_MYCH2 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 232) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 58/150 (38.67%), Postives = 76/150 (50.67%), Query Frame = -2 Query: 342 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 788 Q + G K+ ++VGN LP+ IPEG V N+E G L R++G +A I + D +KL SG + I + CRA IG V + + KAG HK P VRG MNP +HPHGGG Q IG S + P G+K Sbjct: 115 QKISSGPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRDEDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGGEGKQPIGRKSPL---TPWGKK 256
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_METS4 (50S ribosomal protein L2 OS=Methylobacterium sp. (strain 4-46) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 782 V G++ + GN +P+ ++P G +V NVE +G G LAR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG R W P RGVAMNP++HPHGGG + G Sbjct: 117 VVSGEQVDIKPGNAMPIGNMPVGTIVHNVELKIGKGGALARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCYATVGAVSNPDHMNISLGKAG---------RKRWLGRRPHNRGVAMNPIDHPHGGGEGRTSG 242
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_METI4 (50S ribosomal protein L2 OS=Methylacidiphilum infernorum (isolate V4) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = -2 Query: 345 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 782 V G A VGN LP+++IP G + N+E G G L R++G A ++ D + VKLPSG + + + C A +GQV+ K L KAG R + W P+VRGVAMNPV+HP+GGG + G + ++P G+ Sbjct: 116 VVSGPDAPPEVGNSLPLKNIPSGLPIYNIELVPGKGGQLVRSAGSSARMMGL--DKEYAIVKLPSGEIRKVCAECYATVGQVSNPDHFNKSLGKAG------RTRWLGWRPRVRGVAMNPVDHPNGGGQGKSKGGGGWQQLESPWGK 254
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_FRATO (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_FRATH (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |