CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_BARBK (50S ribosomal protein L2 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplB1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16 Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G + GN +P+ ++P GA+V NVE G G +AR++G YA ++ D ++L SG ++++ S C A +G V+ KAG + ++R KR P VRGVAMNPV+HPHGGG + G Sbjct: 116 VVAGLSVDVKPGNAMPLGNMPVGAIVHNVEMKPGKGGQIARSAGAYAQLVGR--DQGMAILRLNSGEQRLVSSNCFATVGAVSNPDHGNINDGKAGRS--RWRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ALCBS (50S ribosomal protein L2 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16 Identity = 48/133 (36.09%), Postives = 75/133 (56.39%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G+ A + +GN LP+R+IP G+ + NVE G G +AR++G +++ D ++L SG + + + C+A IG+V+ + + L KAG + R P VRG AMNPV+HPHGGG + G Sbjct: 116 IQSGEDAPIKLGNALPLRNIPLGSTIHNVEMKPGKGGQIARSAGTSVQLLA--KDGQYVTLRLRSGEMRKVHADCKATIGEVSNSEHSLRSLGKAG-----AKRWRGVRPTVRGAAMNPVDHPHGGGEGRSSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ACIBL (50S ribosomal protein L2 OS=Acidobacteria bacterium (strain Ellin345) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16 Identity = 54/139 (38.85%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 384 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 788 Q V G A ++VGN LP+R+IP G VV N+E G +AR++G A +++ ++D +KLPSG + + C A IGQV + KAG R W P RGV MNPV+HPHGGG + G Sbjct: 114 QKVVSGPDADILVGNALPLRNIPAGTVVHNIELKPGKGAQMARSAGAQAQLVA--KESDYALLKLPSGETRRVLVDCMATIGQVGNLDYENVAIGKAG---------RTRWMGVRPTNRGVVMNPVDHPHGGGEGKTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_XANP2 (50S ribosomal protein L2 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 53/142 (37.32%), Postives = 73/142 (51.41%), Query Frame = -2 Query: 369 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTV 782 V G++ + GN P+ S+P G +V NVE VG G +AR++G YA I+ D V+L SG ++++ C A +G V+ L KAG RN W P RGV MNPV+HPHGGG + G + V Sbjct: 116 VIAGEQVDVKPGNAGPLSSLPVGTIVHNVELKVGKGGQIARSAGTYAQIVGR--DQGYVIVRLNSGEQRLVLGACYATVGAVSNPDHMNISLGKAG---------RNRWLGRKPHNRGVTMNPVDHPHGGGEGRTSGGRNPV 246
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_THENN (50S ribosomal protein L2 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 372 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 773 G A + GN LP+ IP G +V NVE G G +ARA+G Y I++ + D +++PSG + + C A +G V + KAG ++ +R P VRGVAMNPV+HPHGGG + GH T Sbjct: 120 GSDAEIKPGNALPLEKIPVGTLVHNVEFTPGKGGQIARAAGTYCQIMAK--EGDYALLRMPSGELRKVHIKCYATVGVVGNEDHKNEVHGKAGRV--RWLGRR---PHVRGVAMNPVDHPHGGGEGRGKGHHPT 246
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_POLNA (50S ribosomal protein L2 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGG 782 + G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGV MNPV+HPHGGG Sbjct: 116 ILSGSEAPIRVGNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_DESAA (50S ribosomal protein L2 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G +A + GN LP+ +IP G + N+E VG G + R +G +A +++ + +V+LPSG +++ C A IGQV G E L G A K + R P VRGVAMNPV+HP GGG + G Sbjct: 116 VESGPEADIKPGNALPLNNIPLGTQIHNIELKVGKGGQVVRGAGTFAQLVA--KEGKYAQVRLPSGEVRLVLLKCMATIGQV---GNVEHENLALGKAGRKRWLGRR--PSVRGVAMNPVDHPMGGGEGRSSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_CHLTE (50S ribosomal protein L2 OS=Chlorobium tepidum GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 51/147 (34.69%), Postives = 78/147 (53.06%), Query Frame = -2 Query: 345 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 773 G+K + VGN +P+++IP G+ V N+E +G G +AR++G YAV+ + + + +K+PSG + + CRA IG + L KAG R+ W P+ RG+AMNPV+HP GGG + +P GQ Sbjct: 119 GEKVDIKVGNTMPLKNIPIGSDVHNIELKIGKGGQIARSAGAYAVLAAR--EGNYATLKMPSGEIRKVRIECRATIGVIGNAEHENISLGKAG---------RSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQ 254
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_CHLP8 (50S ribosomal protein L2 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = -2 Query: 345 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 773 G+K + VGN +P+++IP G V N+E G G +AR++G YAV+ + + T +KLPSG + + CRA IG + L KAG R+ W P+ RG+AMNPV+HP GGG + +P GQ Sbjct: 119 GEKVDIRVGNTMPLKNIPLGTDVHNIEMKAGKGGQMARSAGSYAVLAAREGVHAT--LKLPSGEIRKVRVECRATIGVIGNSEHENISLGKAG---------RSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQ 254
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_CAUCR (50S ribosomal protein L2 OS=Caulobacter crescentus GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = -2 Query: 342 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 782 V +K + GN P+R++P G ++ N+E G +AR++G YA ++ D +++L SG +++ C A +G V+ + L KAG + H R P VRGVAMNPV+HPHGGG G S R P K Sbjct: 116 VVTAEKVDVKPGNASPLRTLPIGTIIHNIELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCMATVGAVSNPDHMNQNLGKAGRSRHMGRR-----PHVRGVAMNPVDHPHGGGE----GRTSGGRHPVTPAGK 251 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |