CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_CAUCN (50S ribosomal protein L2 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = -2 Query: 342 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 782 V +K + GN P+R++P G ++ N+E G +AR++G YA ++ D +++L SG +++ C A +G V+ + L KAG + H R P VRGVAMNPV+HPHGGG G S R P K Sbjct: 116 VVTAEKVDVKPGNASPLRTLPIGTIIHNIELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCMATVGAVSNPDHMNQNLGKAGRSRHMGRR-----PHVRGVAMNPVDHPHGGGE----GRTSGGRHPVTPAGK 251
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_AZOPC (50S ribosomal protein L2 OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 384 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 788 Q + GK+A VGN LP+ IP G ++ N+E G + R++G +A ++S + + V++PSG + + + CRA IG V+ +E L K+G A + R +C P VRGVAMNPV+HP GGG + G Sbjct: 114 QLIVSGKEAPPEVGNSLPLADIPLGTIIHNIELRPGQGAKMVRSAGVFAQVVSR--EGNYVIVRMPSGETRKVLALCRASIGSVS---NSEHALEKSGKA-GRIRWLGHC-PHVRGVAMNPVDHPMGGGEGRASG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ANAVT (50S ribosomal protein L2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G ++ + GN LP+ +IP G V NVE G G + R++G A +++ + + +KLPSG ++I C A IGQV G T+ L AG A RN W PKVRG MNPV+HPHGGG Sbjct: 116 IIAGPESPIEDGNALPLANIPLGTSVHNVELKAGKGGQIVRSAGATAQVVAK--EGNYVTLKLPSGEVRLIRRECYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ANASP (50S ribosomal protein L2 OS=Anabaena sp. (strain PCC 7120) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G ++ + GN LP+ +IP G V NVE G G + R++G A +++ + + +KLPSG ++I C A IGQV G T+ L AG A RN W PKVRG MNPV+HPHGGG Sbjct: 116 IIAGPESPIEDGNALPLANIPLGTSVHNVELKAGKGGQIVRSAGATAQVVAK--EGNYVTLKLPSGEVRLIRRECYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_AERS4 (50S ribosomal protein L2 OS=Aeromonas salmonicida (strain A449) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = -2 Query: 342 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 773 G A + VGN LP+R+IP G+ V VE G LAR++G + I++ + T R++ SG + + + CRA IG+V + L KAG N + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 119 GADAAIKVGNTLPMRNIPVGSTVHAVEMKPGKGAQLARSAGTFIQILAREGNYVTLRLR--SGEVRKVLAECRATIGEVGNSEHMLRQLGKAGANRWRGIR------PTVRGMAMNPVDHPHGGGEGRNKG----MQPVSPWGQK 251
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_AERHH (50S ribosomal protein L2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = -2 Query: 342 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 773 G A + VGN LP+R+IP G+ V VE G LAR++G + I++ + T R++ SG + + + CRA IG+V + L KAG N + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 119 GADAAIKVGNTLPMRNIPVGSTVHAVEMKPGKGAQLARSAGTFIQILAREGNYVTLRLR--SGEVRKVLAECRATIGEVGNSEHMLRQLGKAGANRWRGIR------PTVRGMAMNPVDHPHGGGEGRNKG----MQPVSPWGQK 251
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_PIPCE (50S ribosomal protein L2, chloroplastic OS=Piper cenocladum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16 Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G + + +GN LP+ +P G + N+E + G LARA+G + +I+ + T R LPSG ++I C A +GQV +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 114 IVSGTEVPISMGNALPLTDMPLGTAIHNIEITLEKGGQLARAAGAVSKLIAKEGKSATLR--LPSGEVRLISKNCSATVGQVGNVEVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SYNP2 (50S ribosomal protein L2 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 782 + G++A +GN LP+ IP G + N+E + G G + R++G +A +++ + D +KLPS +++ C A IG+V L KAG H R P+VRG MNPV+HPHGGG Sbjct: 116 IIAGEEAPYEIGNALPLYKIPLGTEIHNIELYAGRGGQMVRSAGAFAQLVA--KEGDYVTIKLPSKEVRMVRKECYATIGKVGNAEARNLKLGKAGRTRHLGR-----RPQVRGSVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 49/133 (36.84%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G + GNV+P+ ++P G +V NVE +G G +AR++G YA ++ D+D V+L SG ++++ C A IG V+ + KAG + R N RGV MNPV+HPHGGG + G Sbjct: 116 VLAGAYVDVKPGNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGR--DHDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRSRWLGRKPHN-----RGVTMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_RHOP5 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 50/134 (37.31%), Postives = 73/134 (54.48%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-PKVRGVAMNPVEHPHGGGNHQHIG 782 V G + GNV+P+ ++P G +V NVE +G G +AR++G YA ++ D+D V+L SG +++I C A IG V+ + KAG R + W P RGV MNP++HPHGGG + G Sbjct: 116 VIAGAYVDVKPGNVMPLGNMPIGTIVHNVEMKIGKGGQIARSAGTYAQLVGR--DHDYVIVRLNSGEQRLIHGRCTATIGAVSNPDHMNISIGKAG------RTRWLGWRPHNRGVVMNPIDHPHGGGEGRTSG 241 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |