CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_POLSJ (50S ribosomal protein L2 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = -2 Query: 402 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGG 773 G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGV MNPV+HPHGGG Sbjct: 119 GSEAPIRVGNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_MYCPU (50S ribosomal protein L2 OS=Mycoplasma pulmonis GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = -2 Query: 342 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 788 Q + G+ ++VGN L + +IPEG + N+E G+LAR++G YA I+ ++L SG + + + CRA IG V + + KAG HK P VRG MNP++HPHGGG Q IG + + P G+K Sbjct: 115 QRIVSGENVDIIVGNSLELANIPEGTNIHNIELQPKGGGILARSAGSYAQILGKEESGKYVLIRLKSGEVRKVFAKCRATIGIVGNEEHSLVNIGKAGRNRHK-----GIRPTVRGSVMNPIDHPHGGGEGKQPIGRKAPL---TPWGKK 256
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 V G + GN +P+ ++P G ++ NVE G G +AR++G YA ++ D+ ++L SG ++++ S C A +G V+ KAG + ++R KR P VRGVAMNPV+HPHGGG + G Sbjct: 116 VVAGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGR--DHGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRS--RWRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_BACWK (50S ribosomal protein L2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 V G ++ + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 VMSGPESDIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_AZOC5 (50S ribosomal protein L2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 782 V G++ + GN P+ ++P G +V NVE +G G +AR++G YA I+ D V+L SG +++I C A +G V+ L KAG R+ W P RGV MNPV+HPHGGG + G Sbjct: 116 VIAGEQVDVKPGNAAPLSNLPVGTIVHNVEMKIGKGGQIARSAGSYAQIVGR--DQGYVIVRLNSGEQRLIHGACYATVGAVSNPDHMNTSLGKAG---------RSRWLGVKPHNRGVTMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_ACIAD (50S ribosomal protein L2 OS=Acinetobacter sp. (strain ADP1) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = -2 Query: 342 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 782 V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D V+L SG + I CRA+IG+V+ + L KAG + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 116 VQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGTSVQLLGR--DGSYAIVRLRSGEMRKIHVECRAVIGEVSNQENNLRSLGKAGASRW-----RGVRPTVRGMAMNPVDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_ANGEV (50S ribosomal protein L2, chloroplastic OS=Angiopteris evecta GN=rpl2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.111e-16 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 782 + G +A + GN LP+ +P G + NVE G G LARA+G A +I+ + ++ PSG ++I C A +GQ+ K KAG+ ++ KR PKVRGV MNPV+HPHGGG Sbjct: 116 IVSGSEAPISRGNALPLSKMPLGTTIHNVEITPGKGGQLARAAGAVAKLIAK--EGRLATLRSPSGEVRLISQDCLATVGQIGNADINNKNFGKAGSK--RWLGKR---PKVRGVVMNPVDHPHGGG 235
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SYNJB (50S ribosomal protein L2 OS=Synechococcus sp. GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.059e-15 Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 782 + G +A +GN +P+ IP G VV NVE + G G + RA+G A +++ + +KLPSG ++I C A IGQ+ L KAG + ++ +R PKVRG MNPV+HPHGGG Sbjct: 122 IMAGPEAPFEIGNAMPLERIPLGTVVHNVELYPGRGGQMVRAAGAGAQVVAR--EGKYVSLKLPSGEVRMIRGECYATIGQLGNVDHNNISLGKAGRS--RWLGRR---PKVRGSVMNPVDHPHGGG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_PSEA6 (50S ribosomal protein L2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.059e-15 Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G V +E G +AR++G YA I++ T R++ SG + + + CRA IG++ + L KAG N + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGSDAAIKAGNSLPMRNIPVGTTVHAIEMKPGKGAQIARSAGQYAQILARAEGYVTLRLR--SGEVRRVLADCRATIGEIGNAEHMLRSLGKAGANRWRGIR------PTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_NEIMF (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.059e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = -2 Query: 402 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 773 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |