CF832146

Overview
NameCF832146
Unique NameCF832146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1093..1922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V C+   +LP +SF +GGK + LT   Y+ +        C     A+D+ PP GP W LG  F+  ++T FD  N R+GFA A
Sbjct:  317 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRGNNRIGFALA 399          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -3
Query:  218 YVNELCDRLPSPMGESA---VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFA 511
            Y++EL   + +  GE     V C  +SSLP +SF + G  F L+P  YI++    +   C+ G  ++ +    G PLWILGDVF+  Y+ +FD  N +VG A
Sbjct:  292 YLSELLQTIGAQEGEYGEYFVSCDSVSSLPTLSFVLNGVQFPLSPSSYIIQ----EDNFCMVGLESISLTSESGQPLWILGDVFLRSYYAIFDMGNNKVGLA 389          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.976e-11
Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+  V+C+ +  +P ++F I G  F L P  Y+      +   C  G  A  +  P G PLWILGDVF+  Y++V+D +N RVGFA +A
Sbjct:  307 GDFMVNCNYIQDMPTITFVINGSQFPLPPSAYVFN----NNGYCRLGIEATYLPSPNGQPLWILGDVFLKEYYSVYDMANNRVGFAYSA 391          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V C+   +LP +SF +GGK + LT   Y+ +        C     A+D+ PP GP W LG  F+  ++T FD  N R+GFA A
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_MACMU (Renin OS=Macaca mulatta GN=REN PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V C+   +LP +SF +GGK + LT   Y+ +        C     A+D+ PP GP W LG  F+  ++T FD  N R+GFA A
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_MACFA (Renin OS=Macaca fascicularis GN=REN PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V C+   +LP +SF +GGK + LT   Y+ +        C     A+D+ PP GP W LG  F+  ++T FD  N R+GFA A
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_HUMAN (Renin OS=Homo sapiens GN=REN PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V C+   +LP +SF +GGK + LT   Y+ +        C     A+D+ PP GP W LG  F+  ++T FD  N R+GFA A
Sbjct:  323 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALA 405          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = -3
Query:  212 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 472
            G+ +++C +  SLP ++FT+ G  F + P  Y L+V       CIS F  +D   P GPL ILGD F+  +++V+D  N  VG A+A
Sbjct:  315 GQYSIECDKRDSLPDLTFTLAGHNFTIGPYDYTLEV----QGSCISSFMGMDFPEPVGPLAILGDAFLRKWYSVYDLGNNAVGLAKA 397          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+  V+C+ + +LP ++F I G  F L P  YIL     +   C  G     ++   G PLWILGDVF+  Y++V+D  N RVGFA AA
Sbjct:  304 GQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILS----NNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 388          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.658e-11
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+  V+C+ + +LP ++F I G  F L P  YIL     +   C  G     ++     PLWILGDVF+  Y++V+D SN RVGFA AA
Sbjct:  293 GQFLVNCNSIQNLPTLTFIINGVEFPLPPSSYILN----NNGYCTVGVEPTYLSAQNSQPLWILGDVFLRSYYSVYDLSNNRVGFATAA 377          
The following BLAST results are available for this feature:
BLAST of CF832146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
RENI_CALJA2.976e-1138.55Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
PEPC_RAT2.976e-1137.25Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPC_MONDO2.976e-1139.33Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
RENI_PANTR3.886e-1138.55Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]
RENI_MACMU3.886e-1138.55Renin OS=Macaca mulatta GN=REN PE=2 SV=2[more]
RENI_MACFA3.886e-1138.55Renin OS=Macaca fascicularis GN=REN PE=2 SV=1[more]
RENI_HUMAN3.886e-1138.55Renin OS=Homo sapiens GN=REN PE=1 SV=1[more]
CARP_ASPFU3.886e-1139.08Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
PEPC_HUMAN6.629e-1141.57Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPC_MACFU8.658e-1141.57Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832146 ID=CF832146; Name=CF832146; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTTGCACAAACCCAATAAGAGTCCAGGCACCCATTT
ATAAACAAAGTCCAACGTCTTGGGCTTCTCAACAGCTGTCATACATCAGA
GCATTTACATAGAACAGTTATTTAAGGTTTAGTTTCAACATCTTAAAGAA
ACAACTGAAATTCCACGAGGTACGGTTCACTGAGCATAATTTAAAACAAA
CTTATTTACGCGGCTTCAGCAAATCCCACTCTCATGTTGCTGTAGTCAAA
GACTGTGTGGTAGGGACCCATAAAAACATCCCCCAAGATCCAGAGAGGTC
CACGTGGTGGGGCAACATCTAGAGCTGAGAATCCACTTATACATTGAGCT
GCATCTCCCTCGCCCACTTTGAGGATGTACTGATCAGGAGTAAGGTCAAA
TATCTTTCCACCAATCGTAAAGGAAACAATAGGCAAGGAAGACAATCTGC
TACAGTCAACAGCCGATTCTCCCATAGGACTAGGCAACCGATCACAGAGC
TCATTGACATAGTTAAGAATGCGCTCTTGTGTTTGGTTCTGCTTGAGCTG
GTTCTGCATCCACACAACTGCCATCTCACAAGTAGAGCACATTGCATCAT
GGAAACCACCAGATGCTCTATGATTATTCTCAGGAACGACACTCTCAATG
CCCATACTCACACCTCGAGACCCATCAAATGTGCACAAACCAATCTGTGA
GCAAATTTTTTGAGGTTCATCCTTAGCTAAAAGCATATTGATGATCTCCT
CTCCATATTGTGAAACTACAGCCTTGCATTCTTGACTGACAATTCCAGTG
GCTCCAATGGCATGGTTGACTTGAGTTATGATGG
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