CF832149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 6.404e-40 Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3) HSP 1 Score: 163.696 bits (413), Expect = 6.404e-40 Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 5.421e-39 Identity = 76/131 (58.02%), Postives = 96/131 (73.28%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAG 413 VKDV+ EFV+A AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_DICDI (40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.080e-39 Identity = 72/138 (52.17%), Postives = 103/138 (74.64%), Query Frame = 3 Query: 9 TAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDS-KGGRRITSSGQRDLDQVAGRI 419 TA +KDV P EF+ YA LK++G++++P WNDI KT T +EL P +PDW Y R A++ARK+Y+RGG GV ++RR++GG +RNG RP HF+ +G R+ L QLQ+ +IE D+ KGGR IT++G+RDLD++A +I Sbjct: 4 TAVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRIAKQI 141
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.577e-38 Identity = 77/137 (56.20%), Postives = 99/137 (72.26%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 431 VKDV+ EFV+A AA LK+SGK+++P W DIVK KELAP D +W+YIRAAS R +YLRGG+GVGS +IYGG KRNG P HFS S +VAR +L L+ ++E D GGRR+T G RDLD++AG++A + Sbjct: 8 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAAAS 144
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.060e-38 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 410 +VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR IYLR +GVG ++YGG G RP H SGSV R ++ L+ ++E GGRRI+ GQRDLD++A Sbjct: 5 SVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.690e-38 Identity = 75/137 (54.74%), Postives = 101/137 (73.72%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 431 VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIRAAS R +YLRGG GVGS +IYGG +RNG P H+S+ S +VAR +L L+ +IE D GGRR+T+ G RDLD++AG+++ + Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSAAS 142
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.514e-38 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 410 +VKDV +F+ AYAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR IYLR +GVG ++YGG G RP H SGSV R ++ L+ ++E GGRRI+ GQRDLD++A Sbjct: 5 SVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.885e-37 Identity = 74/134 (55.22%), Postives = 98/134 (73.13%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 422 VKDV+ EFV+A AA LK+SGK+++P W D+VK G KELAP D +W+YIR+AS R +YLRGG GVGS +IYG +RNG P H+S S +VAR +L L+ +IE D GGRR+T+ G RDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVA 139
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.074e-37 Identity = 68/134 (50.75%), Postives = 96/134 (71.64%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 +VKDV H F KA AA LK+SGK+++P W I+K EL+PYD DW+Y RAAS+ R +Y+R GVG+ +IYG KRNG+ P H+ +SSGSVAR +L L+ ++E D+ GGR++TS GQ+DLD++A ++ Sbjct: 4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137 The following BLAST results are available for this feature:
BLAST of CF832149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832149 ID=CF832149; Name=CF832149; organism=Citrus sinensis; type=EST; length=599bpback to top |