CF832149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_ARCFU (30S ribosomal protein S19e OS=Archaeoglobus fulgidus GN=rps19e PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.288e-21 Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 410 V DV +K A LK + P W VKTG KE +P DW+Y+R AS+ R++Y+ G +G+ R YGG KR GS+PP F K SG++ R+ LHQL+ ++ ++ GR +T G+ LD+VA Sbjct: 4 VYDVPADLLIKRVAERLK--DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVK-KTREGRVVTPMGRSFLDKVA 130
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_METJA (30S ribosomal protein S19e OS=Methanocaldococcus jannaschii GN=rps19e PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.937e-20 Identity = 53/133 (39.85%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 V DV + ++ A LK I +P W D VKTG +E P DW+YIR AS+ RKIY+ G +GV R YGG K G P HF K SG++ R L +L+ ++E + GR +T G+ LD +A + Sbjct: 4 VYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQELEKLGLVE-KTPEGRVVTPKGRSFLDNIAKEV 134
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_PYRHO (30S ribosomal protein S19e OS=Pyrococcus horikoshii GN=rps19e PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.653e-19 Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 410 V DV V+ A LK +I+ P W VKTG KE P DW+Y R AS+ R++Y+ G +G+ R YGG K G P F K+ GS+ R L QL+ IE GR +T G+ LD++A Sbjct: 4 VYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKIA 133
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_AERPE (30S ribosomal protein S19e OS=Aeropyrum pernix GN=rps19e PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.231e-19 Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRS-GKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGG-LGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 N +V ++ A LK +++ P W KTG KE P D DW+Y+RAAS+ RK+Y +G+ +FR IYGG + GS P HF K+ GSV R IL QL++ ++ GR I+ +G+ LD A I Sbjct: 3 NALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREI 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_HALMA (30S ribosomal protein S19e OS=Haloarcula marismortui GN=rps19e PE=1 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18 Identity = 50/133 (37.59%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 27 DVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGS----RPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAG 413 DV P E ++A L IE P W + KTG +EL P D++ RAAS+ RK+ + G +GV + R YG K+ + RP +K SG++ R L QL+D +E GRR+T G+ LD AG Sbjct: 6 DVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVDGPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRVTGDGRSLLDDTAG 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_THEVO (30S ribosomal protein S19e OS=Thermoplasma volcanium GN=rps19e PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18 Identity = 48/134 (35.82%), Postives = 68/134 (50.75%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 +VK V + + LK KI+ P W VKTG KE P DW Y+RAASM RK+Y+ G LG+ YGG GS+ H + S S+ R + H+L+ +++ K GR ++ G LD + I Sbjct: 3 SVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNASKEI 135
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_THEAC (30S ribosomal protein S19e OS=Thermoplasma acidophilum GN=rps19e PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.697e-16 Identity = 45/131 (34.35%), Postives = 70/131 (53.44%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVA 410 +VK V + + LK KI P W+ VKTG +E +P + DW Y+RAA+M RK+Y+ G LG+ YGG GS+ H ++ S S+ R++ H+L+ ++ K GR ++ G LD + Sbjct: 3 SVKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNAS 132 The following BLAST results are available for this feature:
BLAST of CF832149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832149 ID=CF832149; Name=CF832149; organism=Citrus sinensis; type=EST; length=599bpback to top |