CF832155

Overview
NameCF832155
Unique NameCF832155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.538e-45
Identity = 84/174 (48.28%), Postives = 111/174 (63.79%), Query Frame = -2
Query:  208 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 729
            YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+G               +SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG   +  V++RIGFF  +C   G+  G+NLDC +Q P+G +L+   + +S
Sbjct:  154 YAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.538e-45
Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  147 YAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.330e-45
Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = -2
Query:  208 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 729
            YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+G               +SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RLPGYG  TNIINGG+ECG   +  V++RIGFF  +C   G+  G+NLDC +Q P+G +L    + +S
Sbjct:  153 YAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.655e-45
Identity = 82/172 (47.67%), Postives = 107/172 (62.21%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PG+NLDC NQR +G  L+   M
Sbjct:  151 YAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.655e-45
Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  153 YAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.066e-43
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = -2
Query:  226 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 729
            Y+WGYC+  ++   +S           P + Y+GRGPIQL++N NY   GEA+G               +SFK+A+WFWMT Q PKPSCH+VI  +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+  +D V NRIGF+  +C   GI  G NLDC +QRP+   L A
Sbjct:  164 YSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.376e-43
Identity = 79/163 (48.47%), Postives = 106/163 (65.03%), Query Frame = -2
Query:  244 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 729
            Y+WGYC+ ++ +P+S+            G+ YYGRGP+QL+WN NY +CG A+G               ++FK+AIWFWMT Q PKPSCH VI+ +W+PS  D  AGR+PGYG+ TNIINGG+ECG   +  V +RIGF+  +C   G+ PG NLDC NQR +
Sbjct:  149 YSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.103e-43
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = -2
Query:  217 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 729
            YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+G               +SFK+A+WFWMT Q PKPSCH+VII  W PS+ D  A RLPG+G+ TNIINGG+ECG   ++ V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  ++
Sbjct:  157 YAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.480e-42
Identity = 83/167 (49.70%), Postives = 99/167 (59.28%), Query Frame = -2
Query:  232 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 729
            YAWGYCY+++++                 QY GRGPIQL+WN NY  CG+ L                +SFK+AIWFWM  Q PKPSCH VI   W PSA D+ AGR+PGYG+ TNIINGGIECG  G N A  +RIGF+  +C   G   G NLDC  QRP+G  L
Sbjct:  167 YAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333          
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.480e-42
Identity = 80/163 (49.08%), Postives = 102/163 (62.58%), Query Frame = -2
Query:  244 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 729
            ++WGYC+ ++ +P S            PG+ YYGRGPIQL++N NY   G A+G               +SFK+A+WFWMT Q  KPS H+VI   W PS  D  AGR PGYG+ TNI+NGG+ECG+  +D V NRIGF+  +CG FGI  G NLDC NQRP+
Sbjct:  167 FSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329          
The following BLAST results are available for this feature:
BLAST of CF832155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIT_PHAVU2.538e-4548.28Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI3_SOLTU2.538e-4547.67Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI5_PHAVU4.330e-4548.28Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIC_SOLLC5.655e-4547.67Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_TOBAC5.655e-4548.26Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI9_ORYSJ1.066e-4347.93Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_BRANA2.376e-4348.47Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_SOLTU3.103e-4347.09Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI6_POPTR4.480e-4249.70Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHI2_ORYSJ4.480e-4249.08Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832155 ID=CF832155; Name=CF832155; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTGCCTTAATTGTCATGTTAAAATAATCAAACGATGAAAGAT
GGACAAGACTCATTGATCCATGTTGGATCAGTCTTATTTAATTTACTTAC
AATAAGAGCGTAACAAACTAACAATTTAGTTGTCCACCTACAAGTGTGAC
ATCTAAAGTTTTTATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAACG
TTGATCATGATGATCACATAGATTGTGCCATCAGATTAAGGCCATAAGGC
CGTTGGTTGGAGCAATCAAGATTGTCACCAGGCTGAATCCCAAACTTGCC
ACAGAAAGTGGTAAAGAACCCAATACGGTTACGTACAGCGTCATTCCCAA
CGTAGCCACATTCAATTCCACCGTTGATTATATTTGTGGTTAGACCGTAT
CCCGGAAGCCGGCCGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGTC
GATAATGACTTCGTGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAGA
ACCAGATTGCTGACTTGAATGATAGTACTGGATCAGNGGCAAGTAGGTCT
GGATTGTTCAACAAGTCCACCCCCAAGGCTTCTCCGCACCTTAAGTAATT
GCAATTCCAAGTGAGTTGAATTGGACCTCGGCCATAGTATTGCCCTGGCA
AGGGACATGGACAGTAAGGATAACAGTAGTCGGACGACGCAGGGCTAACT
TGCCTAATATAGCAATATCCCCAAGCATATTCT
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