CF832155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.660e-34 Identity = 70/165 (42.42%), Postives = 89/165 (53.94%), Query Frame = -2 Query: 244 YAWGYCYIRQVSPASSDXXXXXXXXPLP--GQYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 729 + WGYC + +++P +SD P YYGRGP+QL WN NY CG LG LSF++A+WFWM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ +C + PGDNL C NQ + Sbjct: 141 FTWGYCLVNELNP-NSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.802e-33 Identity = 67/127 (52.76%), Postives = 80/127 (62.99%), Query Frame = -2 Query: 229 NCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 606 N NY CG+ L ++FK+A+WFWMT Q PKPSCH VI + W PSA D AGR+PGYG+ TNIINGGIECG G N+A NRIGF+ T+C G G NLDC QRP+G L+ Sbjct: 171 NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.597e-31 Identity = 70/173 (40.46%), Postives = 102/173 (58.96%), Query Frame = -2 Query: 220 YAWGYCYIRQVSPASSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 729 Y+WGYCY ++V A+SD P PG+ Y+ RGP+Q+ +N NY GEA+G ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G+ G NLDC Q P+ ++M+ S Sbjct: 168 YSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = -2 Query: 220 YAWGYCYIRQVSPASSDXXXXXXXXPL-PGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 729 Y+WGYCY ++V A+SD P PG+ Y+ RGP+Q+ +N NY GEA+G ++FK+A+W WMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G+ G NLDC Q P+ +M+ S Sbjct: 168 YSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.764e-30 Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = -2 Query: 244 YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 639 Y+GRGPIQ+++N NY G+A+G + FK+A+WFWMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG V +RIG++ DNLDC NQ+P+ Sbjct: 79 YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.832e-19 Identity = 47/127 (37.01%), Postives = 63/127 (49.61%), Query Frame = -2 Query: 262 QYYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 642 +YYGRGP+QL+WN NY G+A+G SFK+A+WFWMT +V++ G+G TT ING +EC D +RI F+ +C FG+ PGDNL C Sbjct: 183 KYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.025e-18 Identity = 51/154 (33.12%), Postives = 73/154 (47.40%), Query Frame = -2 Query: 262 CYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 714 CYI +++ AS D PG+ YYGRGP+Q++WN NY G+ +G +SFK+A+WFWM N+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 156 CYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 49/154 (31.82%), Postives = 72/154 (46.75%), Query Frame = -2 Query: 262 CYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 714 CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G +SFK+A+WFWM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 153 CYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 55/158 (34.81%), Postives = 80/158 (50.63%), Query Frame = -2 Query: 268 YAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYG-RGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPGDNL 729 +AWG C+I + +D G+ Y RGPIQLT N NY G+A+G +SFK+A+WFWM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G+ G +L Sbjct: 205 HAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of CF832155 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17 Identity = 49/155 (31.61%), Postives = 76/155 (49.03%), Query Frame = -2 Query: 262 YCYIRQVSPASSDXXXXXXXXP--LPGQ-YYGRGPIQLTWNCNYLRCGEALGXXXXXXXXXXXXXXXLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 717 +CYI +++ AS D PG+ Y+GRGPIQL+WN NY CG++L ++F++ +WFWM + P ++++ G+G T IN G+EC + AV RI ++ +CG+ G+ PG NL C Sbjct: 136 FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268 The following BLAST results are available for this feature:
BLAST of CF832155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832155 ID=CF832155; Name=CF832155; organism=Citrus sinensis; type=EST; length=733bpback to top |