CF832188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_HORSE (Actin, cytoplasmic 1 OS=Equus caballus GN=ACTB PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CHICK (Actin, cytoplasmic 1 OS=Gallus gallus GN=ACTB PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CERPY (Actin, cytoplasmic 1 OS=Cercopithecus pygerythrus GN=ACTB PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 241 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 361
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CERAE (Actin, cytoplasmic 1 OS=Cercopithecus aethiops GN=ACTB PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CAVPO (Actin, cytoplasmic 1 OS=Cavia porcellus GN=ACTB PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CANFA (Actin, cytoplasmic 1 OS=Canis familiaris GN=ACTB PE=2 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_CAMDR (Actin, cytoplasmic 1 OS=Camelus dromedarius GN=ACTB PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_BOVIN (Actin, cytoplasmic 1 OS=Bos taurus GN=ACTB PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTB_BOSMU (Actin, cytoplasmic 1 OS=Bos mutus grunniens GN=ACTB PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 255 FRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIANRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ACTA_STRPU (Actin, cytoskeletal 1A OS=Strongylocentrotus purpuratus GN=CYIA PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 8.857e-58 Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 FRCPE LFQP+ +GME+AGIHET YNSIMKCDVDIRKDLY N VLSGGSTMFPGIA RM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 256 FRCPEALFQPAFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376 The following BLAST results are available for this feature:
BLAST of CF832188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832188 ID=CF832188; Name=CF832188; organism=Citrus sinensis; type=EST; length=803bpback to top |