CF832188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP4_KLULA (Actin-related protein 4 OS=Kluyveromyces lactis GN=ARP4 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 464 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 757 E AGI + S+M+ DVD+R L N+VL+GG++ PG++ R+ E+ P+ +K ++++ ER+Y W+GGSILASL TF Q+W+ + EY+E GP Sbjct: 412 EVAGIVDLINKSMMEADVDLRATLAHNVVLTGGTSKIPGLSDRIMHELNKSLPA-LKFRMLSSGHLRERQYQGWLGGSILASLGTFHQLWVGREEYEEVGP 511
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = -2 Query: 467 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESG 757 E +G+ + Y+SIM DVD+R L N+V++GG++ PG+ R+S E+ P+ +K +++ ER+Y W+GGSILASL TF Q+W+ K EY E G Sbjct: 371 EVSGLADLIYSSIMSTDVDLRTTLSHNVVITGGTSSLPGLMDRISAELNRSLPA-LKFRMLTSGQLRERQYQGWLGGSILASLGTFHQLWVGKQEYAEVG 469
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16 Identity = 47/125 (37.60%), Postives = 75/125 (60.00%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPS-IVHRKCF 802 F+ E F + A G+ E ++I +VD+R L NIV++GG ++ G++ R+SK++T A S +K++V A ER++ WIGGS+L SL +F Q+W+SK E+ E G +V +K F Sbjct: 308 FKPSEYPFDGETVPDTARGLSEMVVDTINASNVDVRAHLANNIVITGGGSLVQGLSDRVSKDVTQ-ALSGLKVRVAAASNQEERRHGAWIGGSVLGSLGSFHQLWVSKQEWQEKGGDYLVEKKRF 431
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16 Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = -2 Query: 446 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 802 F PE+LF PS IG++ GI E SI +++ + NIVL+GG+++FPG R+ E+ L P+ + VV P W GG +++ F+ M +++ +Y+E+G S+ K Sbjct: 275 FAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYAWEGGKLISENDDFEDMVVTREDYEENGHSVCEEK 393
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = -2 Query: 446 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 802 F PE+LF PS IG++ GI E SI +++ + NIVL+GG+++FPG R+ E+ L P+ + VV P W GG +++ F+ M +++ +Y+E+G S+ K Sbjct: 275 FAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCLTPTDYDVSVVLPENPITYSWEGGKLISENDDFEDMVVTREDYEENGHSVCEEK 393
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP6_DICDI (Actin-related protein 6 OS=Dictyostelium discoideum GN=arpF PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = -2 Query: 440 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 802 F PE+LF PS IGM AG+ E+ SI + ++ LY NI+L GGST+FPG+ R+ E+ LAP I + P + S GG LA + + ISK +Y+E G + ++K F Sbjct: 370 FTVPELLFNPSDIGMNQAGLAESIVQSINCTNSNLHIPLYSNIILLGGSTLFPGLKERLELELRKLAPEQYNINIFQPQDPILSPLYGGIRLAQQPDYLKYSISKQDYEEYGYNYCNKKFF 490
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16 Identity = 40/119 (33.61%), Postives = 66/119 (55.46%), Query Frame = -2 Query: 446 FRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 802 F PE+LF PS IG++ GI E +SI +++ + NIVL+GG+T+FPG R+ E+ L P+ + VV P W GG +++ F+ + +++ +Y+E G +I K Sbjct: 275 FAVPEILFHPSDIGIQEMGIPEAIVDSIQNLPEEMQPHFFKNIVLTGGNTLFPGFRDRVYSEVRCLTPTDYDVSVVLPENPITYSWEGGKLISENDDFEDLVVTREDYEEHGHNICEEK 393
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.868e-15 Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = -2 Query: 458 FRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEIT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 802 F PE+ F P + + E N I C +D+R+ LY NIVLSGGSTMF R+ ++I + P + ++V+ ++Y+VW GGS+LAS F Q+ +K Y+E GPSI Sbjct: 276 FLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYGPSI 407
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP3_TAKRU (Actin-related protein 3 OS=Takifugu rubripes GN=actr3 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15 Identity = 49/132 (37.12%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 458 FRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAAR--------------MSKEITA--LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 802 F PE+ F P + I E I C +D+R+ LY NIVLSGGSTMF R MS+E++ L P + ++V+ ++Y+VW GGS+LAS F Q+ +K +Y+E GPSI Sbjct: 276 FLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSI 407
BLAST of CF832188 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = -2 Query: 443 RCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAARMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA-SLSTFQQMWISKGEYDESGPSIVHRKC 799 R PE++FQPSLIG E AGI ET + + DI++ L N+ L+GG+TM+PG+ ARM KE+ + P +V W G A + ++WI++ EY+E G + C Sbjct: 450 RAPEIIFQPSLIGEEQAGIAETLQYILDRYPKDIQEMLVQNVFLTGGNTMYPGMKARMEKELLEMRPFRSSFQVQLASNPVLDAWYGARDWALNHLDDNEVWITRKEYEEKGGEYLKEHC 569 The following BLAST results are available for this feature:
BLAST of CF832188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832188 ID=CF832188; Name=CF832188; organism=Citrus sinensis; type=EST; length=803bpback to top |