CF832190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.238e-38 Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = -2 Query: 210 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 626 PC Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+W WMT + KPSCH+V++ E++P DV A R G+GL TNI+NGG+EC G+ V NRIGF+ +C G+ G NLDC +Q+P+ Sbjct: 152 PCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDCEHQQPF 290
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.895e-37 Identity = 71/148 (47.97%), Postives = 99/148 (66.89%), Query Frame = -2 Query: 186 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 626 PC Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP V+FK+A+WLWMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G+ G NLDC Q P+ ++M+ S Sbjct: 192 PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.474e-37 Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = -2 Query: 186 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQ-PPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQS 626 PC Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP V+FK+A+WLWMTA+ P +PS H V+ +W P+ D AGR PGYGLTTNI+ GG++C G + +R+ F+ +C G+ G NLDC Q P+ +M+ S Sbjct: 192 PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC--AGGNGGADRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.512e-37 Identity = 70/132 (53.03%), Postives = 91/132 (68.94%), Query Frame = -2 Query: 210 YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 605 Y+GRGPIQ+++N NY G+A+GVDLL NPDL+ +D V FK+A+W WMT Q PKPS H+VI W PS+ D AGR+PGYG+ TNII+GG+ECG V +RIG++ DNLDC NQ+P+ Sbjct: 79 YFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.199e-37 Identity = 69/138 (50.00%), Postives = 87/138 (63.04%), Query Frame = -2 Query: 210 PLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 620 P YYGRGP+QL WN NY CG LG +LL+ P+ +ATDPV+SF++A+W WM PSCHEVI EW PS D+ AGR PG+G+ TNII G EC G +NRI ++ +C + PGDNL C NQ + Sbjct: 167 PCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETF 304
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.838e-25 Identity = 55/133 (41.35%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 228 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 626 PC +YYGRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+W WMT +V++ G+G TT ING +EC D +RI F+ +C FG+ PGDNL C Sbjct: 177 PCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = -2 Query: 228 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 626 PC +YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+W WM N+V+ L G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 177 PCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.318e-22 Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = -2 Query: 228 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 626 PC +Y+GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++W W+ + VI+D P+ G+G T IINGG EC + R+G++ +C + G+ PG+NL C Sbjct: 135 PCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILD---PN---------QGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = -2 Query: 228 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 626 PC +YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+W WM N+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 174 PCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CF832190 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22 Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = -2 Query: 234 PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVVSFKSAIWLWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGND--AVR-NRIGFFTTFCGKFGIQPGDNL 626 PC +Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+W WM+ KPSCH++++ +AN A R+P G+ NII+ G+D AVR + IGF+ +C G+ G +L Sbjct: 229 PCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVL-----NANSA-ANRIPNKGVIGNIISRAF-----GHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351 The following BLAST results are available for this feature:
BLAST of CF832190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832190 ID=CF832190; Name=CF832190; organism=Citrus sinensis; type=EST; length=627bpback to top |