CF832198
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_EUCGG (50S ribosomal protein L14, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 40/119 (33.61%), Postives = 70/119 (58.82%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ + G I +E L + +I S A ++ Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEALPNTPLERSEVIRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_CICAR (50S ribosomal protein L14, chloroplastic OS=Cicer arietinum GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADN+GA+ L I + G R A +GD+++A +KK P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I I +E L + +I S A ++ Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AYIGDIIVAVIKKAVPNTPFERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVVIDKEGNPKGTRIFCAIARELRQLNFTKIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RK14_CARPA (50S ribosomal protein L14, chloroplastic OS=Carica papaya GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 41/119 (34.45%), Postives = 70/119 (58.82%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIVR K +R +G+ + ++DNA V+++ +G KG+ I G I +E L + +I S A ++ Sbjct: 8 LNVADNSGARELMCIRIIGASNRRY----AHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELKRNNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIPRELRQLNFTKIVSLAPEVL 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_SYNS3 (50S ribosomal protein L14 OS=Synechococcus sp. (strain CC9311) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADN+GAK + I V G R A VGD+++ATVK P++ K ++ AV+VR + RR G + F+DNA VI+N KG+ + GP+ +E + + +I S A ++ Sbjct: 11 ADNSGAKRIQCIRVLGTNRRY-----AHVGDVIVATVKDAMPNMGVKKSDIVKAVVVRTKATMRRDTGNSIRFDDNAAVIINDDKNPKGTRVFGPVARELRERSFTKIVSLAPEVI 121
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STRSV (50S ribosomal protein L14 OS=Streptococcus sanguinis (strain SK36) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_STRGC (50S ribosomal protein L14 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 40/102 (39.22%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 352 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 648 ADN+GA+ + I V G GR A +GD+++A+VK+ P K V+ AVIVR + RRKDG ++ F++NA VI+ +G+ I GP+ +E D Sbjct: 11 ADNSGAREILTIKVLGGSGR----KFANIGDVIVASVKQATPGGAVKKGDVVKAVIVRTKSGARRKDGSYIKFDENAAVIIREDKTPRGTRIFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_PROAC (50S ribosomal protein L14 OS=Propionibacterium acnes GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKP--DLRK-KVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD-LWPRIASAANAIV 648 ADNTGAK L I V G G R A +GD ++ TVK P +++K +V+ AV+VR K RR DG ++ F++NA V++ GE +G+ I GPI +E + + RI S A ++ Sbjct: 11 ADNTGAKELLCIRVLG--GSKRRY--AYLGDTIVCTVKDAIPGGNVKKGEVVKAVVVRTVKSHRRPDGSYIKFDENAAVLLKGDGEPRGTRIFGPIARELREKKFMRIVSLAPEVI 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_MYCPN (50S ribosomal protein L14 OS=Mycoplasma pneumoniae GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = -2 Query: 313 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 657 +N ADNTGAK + II V G R A +GD+V+ +VK P + +V+ AVIVR +K +RKDG + F+DNA V++ +G+ I GP+ +E + + +I S A +V Sbjct: 8 LNVADNTGAKQVGIIKVLGS----TRKRYAFLGDVVVVSVKDAIPSGMVKKGQVLRAVIVRTKKGQQRKDGTHLKFDDNACVLIKEDKSPRGTRIFGPVARELRERGYNKILSLAVEVV 122
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_MYCA5 (50S ribosomal protein L14 OS=Mycoplasma arthritidis (strain 158L3-1) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = -2 Query: 352 NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 654 N ADN+GAK + II K + G + R S +GD+V+ TVKK P +V+ AVIVR ++ R++G + F+DNA V++ G ++G+ + GP+ +E D Sbjct: 9 NVADNSGAKEVMII--KNLGGSIVR--STNIGDVVVVTVKKAIPHGFVKEGQVLKAVIVRTKRGLMRENGSHIRFDDNAVVLIKEDGTLRGTRVFGPVARELRD 108
BLAST of CF832198 vs. ExPASy Swiss-Prot
Match: RL14_LACRJ (50S ribosomal protein L14 OS=Lactobacillus reuteri (strain JCM 1112) GN=rplN PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 40/116 (34.48%), Postives = 69/116 (59.48%), Query Frame = -2 Query: 313 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKEC-ADLWPRIASAANAIV 648 ADN+GA+ + +I + G +R+ + +GD+++ATVK+ P + V+ AV+VR + RKDG ++ F++NA V++N KG+ I GPI +E D + +I S A ++ Sbjct: 11 ADNSGAREILVIKILGG----SRVKTGNIGDIIVATVKQATPGGVVKKGDVVKAVVVRTKHGIHRKDGSYIKFDENAAVLINNDKSPKGTRIFGPIARELRGDDFMKIVSLAPEVL 122 The following BLAST results are available for this feature:
BLAST of CF832198 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 411
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832198 ID=CF832198; Name=CF832198; organism=Citrus sinensis; type=EST; length=733bpback to top |